KEGG   Pannonibacter phragmitetus: APZ00_03770
Entry
APZ00_03770       CDS       T04214                                 
Name
(GenBank) type II CRISPR RNA-guided endonuclease Cas9
  KO
K09952  CRISPR-associated endonuclease Csn1 [EC:3.1.-.-]
Organism
pphr  Pannonibacter phragmitetus
Brite
KEGG Orthology (KO) [BR:pphr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pphr02048]
    APZ00_03770
Prokaryotic defense system [BR:pphr02048]
 CRISPR-Cas system
  Type II CRISPR-Cas system
   Type II signiture cas proteins
    APZ00_03770
SSDB
Motif
Pfam: RuvC_III HNH_4 Cas9_a
Other DBs
NCBI-ProteinID: ALV26298
UniProt: A0A0U2W148
Position
793144..796434
AA seq 1096 aa
MKNIFSFDIGTNSIGWAVLALDGNGDPVRIADAGVRIFSDGRDPKSKASLAEARRMARAM
SRRRDRTLRRKRATLRTLAEIGLMPDTSSARQAQLRETSDPKSGSGQLTRNPYALRALAL
EEKLPLFHIGRALYHLGQRRGFQSNRKTDRKDNDKGKIALGIEELHAAMRQDGAQTYGQW
LARRHALGQAVRLRSGALDLEGEGYAFYPERKLLEDEFHRIWEAQARHYPDILTPERRDH
LFTVMFFQRPLKKPKVGKCSFNNQEERLSKAHPLFQEFRLYKEVNELEIVEPDLTHKKLT
LDQRNALVKKLQVSREASFAALRKVLKLRPDQRLNKESESRTKLKGNEVYAVLSDKTRFG
PRWGTFSQAEQWAIIERLKEEEDPGRLFAWLRSAFGIEGEQAADIANVHLPEGHGRLGKT
ALEAMLEELKAEVITEAEAAKRCGYDHARLGGGSDEGEPELPPYQEILQHRIPPGTNNPD
DPYDIEKGRFTNPTVHIALNQLRHVMNTLIRRYGKPAQIAVELARDLKLSERQKEEVNRT
IARNTRDAERRGKTLEENRIPNTGYNRTLLRLWEELNPGKVEDRCCIYTGKPISISMLFS
GEVDIDHILPWSRTLDDSHGNKLLCLREANRVKRNRAPADVTEWRDNYDEILSRAARLPQ
NKRDRFAPDAMERFEKAGGFLARQLTDTQYLSRMALEYLACLFPAEEMDGFGELRRHRYI
NVCPGRLTEMLRRNWGLNSILSDSQLGETAQEKNRKDHRHHAIDAIVIGVTGRSLLNRIS
YAAGRLEAQQLETLVKEAAATNKPWDGFREDVAKVVGGIIVSHKPDHGTAGRKAKDPARQ
QTAGRLHNDTAYGLTGETDARGNTIVVRRKPFLSLTSKDIPSIRDEALRAVLEQHLRGIP
DGKAFQAALDAFRKQKGFHHYHGIRHVRLTEPLSVIGIKDRDGKVYKGYKGDANQRYDVW
ETLDGKWHAEVVSMFDAHQPGWQSRFHAENPTARRVLRLQQDDMVALNAPDGGRLLVRVV
KFRQNGQITFAGHNESGNLKARDAASNEQDPFKYISRMASSLKDCGCRQVRIDATGQVFD
PGPQDRASRLQKQSKR
NT seq 3291 nt   +upstreamnt  +downstreamnt
atgaagaacatcttctccttcgacatcggcacaaattcgatcggctgggccgtcctggct
ctcgatggcaatggcgacccggtgcggattgccgatgccggggtgcggatcttttcggat
gggcgcgacccgaagtccaaggcttcgctggctgaagcgcggcggatggcgcgggccatg
tcgcggcggcgggaccggaccttgcggcgcaagcgggcaacgctgcgcacgctggccgag
attggcctgatgccggacacatcctctgcacggcaggcgcagctgcgggagacttctgat
ccgaagtccggatcaggccagctcacccgcaatccctatgccctgcgcgcccttgcgctt
gaggagaagctgccgctcttccacattggccgtgcgctgtatcaccttggccagcggcgg
ggcttccagtccaaccgcaagacggaccgcaaggacaacgacaagggcaagatcgccctt
ggcatcgaagagctgcacgccgccatgcggcaggacggggcgcagacctatggccagtgg
ctcgcccggcgccatgcgctggggcaggccgtgcggctgcgctccggcgcgctggatctg
gagggggaaggctatgccttttaccctgagcggaagctgctggaggatgagtttcatcgc
atctgggaggcgcaggcccgccattatccggacattctgacgcccgaacggcgcgatcac
ctgttcacggtcatgttcttccagcgcccgctgaaaaagccgaaggtgggcaaatgctcc
ttcaacaatcaagaagagcgcctgtcgaaggcgcatccgctgtttcaggagttccgcctc
tacaaggaggtcaacgagcttgagatcgtcgagccggatctgacgcacaagaagctgacg
ctggatcagcgcaatgcgctggtgaagaagctgcaggtcagccgcgaggcgagctttgcc
gcgctgcgcaaggtgctgaagctgcgcccagaccagcgcctcaacaaggaaagcgagagc
cggacgaagctgaagggcaacgaagtctatgccgtgctgagcgacaagacccgcttcggc
ccgcgctggggcaccttcagccaggcggagcaatgggccatcatcgagcggctgaaggag
gaggaagaccccggccgcctgttcgcgtggctgcgcagcgcgttcggcatcgaaggtgag
caggcggcagacattgccaatgtgcacttgccggaaggccacgggcggctgggcaagacg
gcactggaggccatgctggaggagctgaaggcggaggtgatcaccgaggccgaggcggcg
aagcgctgcggctatgatcatgcccgtcttggcggcggcagcgacgaaggcgaacccgag
ctgccgccctatcaggagatcctgcagcaccgcattccgccgggaaccaacaacccggat
gatccctatgacatcgaaaaaggccgcttcaccaatcccacggtgcatatcgccctgaac
cagctgcgccacgtgatgaacacgctgatccggcgatatggcaagccggcgcaaatcgcg
gtggaactggcgcgtgatctgaagctctctgagcggcagaaggaagaagtcaaccgcacc
attgcccgcaacacccgcgatgcggaacgccggggcaaaacgctggaagagaacaggatt
ccgaatacaggctacaaccgcaccctgttgcggctgtgggaggagttgaatccgggcaag
gttgaagaccggtgctgcatctacacgggcaagccgatcagcatttccatgctgttttcc
ggcgaggtagacattgaccacatcctgccctggtcccgcacgctggatgacagccatggc
aacaagctgctgtgcctgcgcgaggcaaaccgggtgaaacgcaaccgggccccggctgat
gtgaccgaatggcgggacaactatgacgagatcctgtcccgcgccgcccgcctgccgcag
aacaagcgggaccgcttcgccccagatgcgatggaacggttcgagaaggctggcggcttc
ctcgcccgtcagctgacggacacgcaatatctctcgcggatggcgctggaatatctcgcc
tgcctgtttccggccgaggagatggatggcttcggggagctaaggcggcacaggtacatc
aatgtttgtcccggcaggctgacagaaatgctgcggcggaactgggggctcaacagcatt
ctgtcggacagccagctgggcgaaacagcgcaggagaagaaccgcaaggaccaccggcac
catgccattgatgccattgtcattggcgtcactggccgcagcctgctcaaccgcatttct
tacgctgccgggcggctggaggcacagcagctggagacgctggtgaaggaagcagccgcg
acgaacaaaccctgggacggcttccgggaggatgtggcaaaggtggtgggcggcatcatc
gtcagccacaagcccgaccatggcaccgctggccgcaaggcaaaggatccggcccgccag
cagacggcagggcggctgcacaatgacacggcctatggcctgaccggcgaaaccgatgca
cgcggcaacaccattgtggtgcggcgcaagccgttcctgtcactcacctccaaggacatt
ccgtccatccgggatgaggccctgcgggcggtgctggagcagcatctgcgcggcattccc
gatggcaaggcgtttcaggcggcgctggatgccttccgcaagcagaagggcttccaccat
tatcacggcatccgccatgtccgcctgacggagccgctttccgttatcggcatcaaggac
cgggacggcaaggtctacaagggctacaagggcgatgccaatcagcgctacgatgtgtgg
gaaacgctggacggcaagtggcatgcggaagtcgtgtccatgttcgacgcgcaccagccg
ggctggcaatcccggttccacgcggaaaaccccactgcccgccgggtgctgaggttgcag
caggatgacatggtcgccctgaatgcgcctgacggcggccgtcttctggtgcgtgtggtg
aagttccggcagaacgggcagataaccttcgccgggcataacgagagtggtaacctgaag
gctcgcgatgcggccagcaacgaacaggaccctttcaaatacatctcgcgcatggccagc
agcctgaaggactgcggttgccgtcaagtccgcatcgatgcaacaggccaggtgtttgac
cccggcccgcaggaccgggcctccagactgcaaaagcaatcaaagcgataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   KEGG ORTHOLOGY (1)   
   RefGene (34)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (44)   

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