KEGG   Pannonibacter phragmitetus: APZ00_10815
Entry
APZ00_10815       CDS       T04214                                 
Name
(GenBank) conjugal transfer protein TrbB
  KO
K20527  type IV secretion system protein TrbB [EC:7.4.2.8]
Organism
pphr  Pannonibacter phragmitetus
Pathway
pphr02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:pphr00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    APZ00_10815
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pphr02044]
    APZ00_10815
Enzymes [BR:pphr01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     APZ00_10815
Secretion system [BR:pphr02044]
 Type IV secretion system
  Trb secretion system protein
   APZ00_10815
SSDB
Motif
Pfam: T2SSE TrwB_AAD_bind Zeta_toxin DEAD AAA_16 FtsK_SpoIIIE AAA_28 nSTAND3 AAA_19 AAA_30 MMR_HSR1 CbiA GTP_EFTU MoCF_biosynth ABC_ATPase AAA_7 AAA_11 Sigma54_activat ResIII ATPase AAA_22 RsgA_GTPase Septin AAA_2 TsaE PCMT DUF815
Other DBs
NCBI-ProteinID: ALV27494
UniProt: A0A0L0ITN1
Position
2328867..2329865
AA seq 332 aa
MPGINHKQANVDRGARMLRTALGPAISTLLQDPSVVEVMLNPDGRIWVDRLSEGLADTGE
ILSAADGERIVRLVAHHVGVEVHARSPRVSAELPETGERFEGLLPPVVSAPAFAIRKPAV
AVFTLDDYVAAGIMSADQAETLRAAVASRANILVAGGTSTGKTTLTNALLAEVAKTQDRV
VIIEDTRELQCAASNLVAMRTKDGVATLSELVRSSLRLRPDRIPIGEVRGAEALDLLKAW
GTGHPGGIGTIHAGSGIGALRRLEQLIQEAVVTVPRAMIAETIDLVAVLAGRGSARRLAE
LACVEGLGPDGDYRISLAFPDTSIPHVPGEPA
NT seq 999 nt   +upstreamnt  +downstreamnt
atgccaggcatcaaccacaaacaggcaaatgtggaccgcggcgcgcgcatgctccggaca
gcgctcgggcctgccatctcaaccctgctgcaagacccgtctgtcgtcgaggtcatgctg
aacccggacggacgcatctgggtggaccggctgtccgaagggttggccgatacgggcgaa
atactgtccgccgctgacggtgagcgcatcgtgcggctggtcgcccaccatgtcggcgtc
gaagtccatgcgcgcagcccgcgcgtctcggccgaactgcccgaaaccggcgagcgcttc
gaggggttgctgccgccggtcgtgtccgcacccgccttcgccatccgcaagcccgcggtc
gcagtattcacgctagacgactatgtggccgccggcatcatgtccgccgatcaggcggaa
acgctccgcgcggccgtcgcgtcccgcgccaacatccttgtcgcaggcggcacgtccacc
ggtaaaacgacgctgaccaatgcgctgctcgccgaggtggcgaagacgcaggatcgggtc
gtcatcatcgaggacacccgcgaactgcaatgcgcagcgtcgaatctcgtggcgatgcgc
accaaggatggtgtcgccaccttgtcggaactggtgcggtcttcgctgcgcctgcgtccg
gaccgcattccgatcggtgaggtgcgcggcgccgaggcgctcgatctcctcaaagcctgg
ggcaccggccatccgggcggcatcggcaccatccatgctggttccggcatcggcgccctg
cgccgcctcgaacaactcatccaggaagccgtcgtcactgtgccgcgcgcgatgatcgcg
gagaccatcgacctcgtggccgtcctcgctggccgcggctccgcgcgccggctggccgaa
cttgcctgcgtcgaagggctcggccccgacggcgattaccggatttccctcgcttttccc
gacacctcaatccctcacgttccaggagaacctgcatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (27)   
   Pfam (27)   
All databases (42)   

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