KEGG T02170: YSA

Pseudomonas putida ND6: YSA_01341

Entry

YSA_01341         CDS       T02170

Name

(GenBank) TraR/DksA family transcriptional regulator

K06204

RNA polymerase-binding transcription factor

Organism

ppi Pseudomonas putida ND6

Brite

KEGG Orthology (KO) [BR:ppi00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ppi03000]
    YSA_01341
   03021 Transcription machinery [BR:ppi03021]
    YSA_01341
   03009 Ribosome biogenesis [BR:ppi03009]
    YSA_01341
Transcription factors [BR:ppi03000]
Prokaryotic type
  Other transcription factors
   Others
    YSA_01341
Transcription machinery [BR:ppi03021]
Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription elongation factors
     YSA_01341
Ribosome biogenesis [BR:ppi03009]
Prokaryotic type
  rRNA transcription factors
   YSA_01341

SSDB

Motif

Pfam:

zf-dskA_traR DksA_CC T2SSK_1st DUF5440

Other DBs

NCBI-ProteinID:

AFK67498

UniProt:

I3UPS7

Position

complement(691694..692137)

AA seq 147 aa
MNRPNAHFFIEKSMTKEQLLAMSADDYMNADQLAFFTELLQAMKVETHERIELSRTTIEG
LDTPSDPADVASVEEERSWLVNAIDRDQRLLPQLEMALDRIADESFGWCDDSGEPIGLKR
LLISPTTKYCIEAQERHEQLDRHQRQV

NT seq 444 nt +upstreamnt +downstreamnt
atgaatcgcccaaatgcacattttttcatagagaaatcgatgaccaaggaacagttgctg
gccatgtcggccgatgactacatgaacgccgaccagcttgccttctttactgagctgctg
caggcgatgaaagtcgaaacccatgaacgcatcgaactcagccgcaccaccatcgaaggc
ctggacaccccgtcagaccccgccgacgtggcttcggtcgaagaagaacgtagctggctg
gtaaatgccatcgaccgcgaccagcgcctgctgccacagctggaaatggccctggaccgt
attgccgacgaaagcttcggctggtgcgatgacagtggtgagcctatcggcctgaagcgc
ttgctgatcagcccgaccaccaaatactgcatcgaagcccaggagcgccacgagcagctc
gaccgccaccagcgtcaggtataa

All links

Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

Download RDF

DBGET integrated database retrieval system