KEGG   Pseudomonas putida ND6: YSA_02558
Entry
YSA_02558         CDS       T02170                                 
Name
(GenBank) ribonuclease HII
  KO
K03470  ribonuclease HII [EC:3.1.26.4]
Organism
ppi  Pseudomonas putida ND6
Pathway
ppi03030  DNA replication
Brite
KEGG Orthology (KO) [BR:ppi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    YSA_02558
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppi03032]
    YSA_02558
Enzymes [BR:ppi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.4  ribonuclease H
     YSA_02558
DNA replication proteins [BR:ppi03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    RNase H
     YSA_02558
   Elongation factors (archaeal)
     YSA_02558
SSDB
Motif
Pfam: RNase_HII E1_dh
Other DBs
NCBI-ProteinID: AFK68156
UniProt: I3URN5
Position
complement(1382462..1383085)
AA seq 207 aa
MQIGLDFNLVEDLVAGVDEVGRGPLCGAVVTAAVILDPARPILGLNDSKKLTEARREALF
DEICEKALSFCIARAEVEEIDSLNILQATMLAMQRAVEGLHITPKLALIDGNRCPKLAVP
AAPVVKGDSQVPAIAAASILAKVTRDREMSAFELIYPGYGIGGHKGYPTPVHLEALARLG
PTPIHRRSFAPVRAAWEVREGVTDSLI
NT seq 624 nt   +upstreamnt  +downstreamnt
atgcaaattggactggacttcaacctggtagaagacctggtcgccggcgttgacgaagtg
ggccgtggcccgctgtgtggcgcggtggtaacggcggcggtgattcttgatcccgcgcgg
ccgattctcggcctgaacgattcgaagaaactcaccgaagccaggcgtgaggcgctgttc
gacgagatctgcgaaaaggccttgagcttctgcatcgcccgcgccgaagtcgaggaaatc
gacagcctgaacatcctgcaggccaccatgctggccatgcagcgggcagtggagggcttg
cacattacgccgaagctggccctgatcgatggcaatcgctgcccgaagctggcggtgcca
gcagcaccggtggtcaagggggatagccaggtgccggccattgcggcggcatcgatcctg
gccaaggtgacccgtgatcgggaaatgagtgcgttcgaactgatctacccgggttatggc
attggcgggcacaagggctacccgaccccggtgcatctcgaggccttggcgcgccttggg
cctacgcccattcatcggcgttccttcgccccggtgcgggcggcttgggaagtgcgcgaa
ggcgtcaccgattccctgatctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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