KEGG   Pseudomonas putida ND6: YSA_04382Help
Entry
YSA_04382         CDS       T02170                                 

Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
ppi  Pseudomonas putida ND6
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:ppi00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    YSA_04382
Enzymes [BR:ppi01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     YSA_04382
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     YSA_04382
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(2372333..2373145)
Genome map
AA seq 270 aa AA seqDB search
MPELPEVETTRRGIAPHLEGQRVSRVVVRDRRLRWPIPEDLDVRLSGQRIVSVERRAKYL
LINAEVGTLISHLGMSGNLRLVELGLPAAKHEHVDIELESGLMLRYTDPRRFGAMLWSLD
PLNHELLLRLGPEPLTDLFDGERLFQLSRGRSMAVKPFIMDNAVVVGVGNIYATEALFAA
GIDPRREAGGISRARYLKLAIEIKRVLAAAIEQGGTTLRDFIGGDGQPGYFQQELFVYGR
GGQPCKVCGTELREVKLGQRASVYCPRCQR
NT seq 813 nt NT seq  +upstreamnt  +downstreamnt
atgccggaattgccagaagtagaaaccacccggcgcggtattgcgccacacctggaaggc
cagcgcgtcagccgtgtggtggtacgcgaccggcgtctgcgctggccgattccggaagac
ctcgatgtgcgcctgtcagggcagcgcatcgtcagcgtggagcgacgtgccaagtacctg
ttgatcaatgccgaagtgggtacgctgatcagccacttgggcatgtcgggcaacctgcgg
ctggtcgagctgggcttgccggcggccaagcatgagcatgtcgacatcgagctggagtcc
gggctgatgctgcgctacaccgacccacgccgctttggtgccatgctgtggagcctggac
cctctgaaccatgagctactgctgcgcttggggcctgagccgctgaccgacctgttcgat
ggtgaacggctgttccagctgtcccgcgggcggtcgatggcggtcaagccgttcatcatg
gacaacgcggtggtggtaggggtgggcaacatctacgccaccgaggcgctgtttgccgcc
ggtatcgacccacgccgggaggcgggcgggatttcccgggcgcgctacctgaaactggcg
atcgagatcaaacgggtgctggcggcggccatcgagcagggcggtaccaccctgcgcgac
tttatcggtggcgacgggcagccggggtacttccagcaggaactgtttgtgtacgggcgt
ggcggacagccgtgcaaggtatgcggcactgagttgcgcgaagtgaagctggggcagagg
gcgagcgtgtactgcccgcgctgccaacgctga

DBGET integrated database retrieval system