KEGG T02170: YSA

Pseudomonas putida ND6: YSA_08745

Entry

YSA_08745 CDS T02170

Definition

isocitrate dehydrogenase, NADP-dependent

Orthology

K00031

isocitrate dehydrogenase [EC:1.1.1.42]

Organism

ppi Pseudomonas putida ND6

Pathway

ppi00020	Citrate cycle (TCA cycle)
ppi00480	Glutathione metabolism
ppi01100	Metabolic pathways
ppi01110	Biosynthesis of secondary metabolites
ppi01120	Microbial metabolism in diverse environments
ppi01210	2-Oxocarboxylic acid metabolism
ppi01230	Biosynthesis of amino acids

Module

ppi_M00009	Citrate cycle (TCA cycle, Krebs cycle)
ppi_M00010	Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:ppi00020]
Metabolism; Metabolism of other amino acids; Glutathione metabolism [PATH:ppi00480]

SSDB

Motif

Pfam:

IDH DUF4115

Other DBs

NCBI-GI:

395448367

NCBI-GeneID:

12988141

UniProt:

I3V184

Position

complement(4772336..4774561)

AA seq 741 aa
MPTRSKIIYTFTDEAPALATYSLLPIIEAFTASADIAVETRDISLAGRILAAFPEQLGAE
KQVGDHLAELGQLATTPEANIIKLPNISASVPQLKAAIKELQGKGFNIPDYADEPATAEE
KESRARYDRIKGSAVNPVLREGNSDRRAPLSVKNYARKHPHKMGAWAADSKSHVAHMTQG
DFYGSEKAALIEADDSLRIELVGKDGSTTVLKEKTAVKAAEVIDCATMSRKALKAFIAEQ
IADAKAAGVLLSVHLKATMMKVSDPIMFGVIVEEFYNDVLTKHAAALAEVGFNANNGIGD
LYARIKDLPADKQAEIEADIQALYAERPALAMVNSDKGITNLHVPSDVIVDASMPAMIRD
SGKMWNTAGELQDAKAVIPDRCYAGIYQATIEDCKVNGAFDPTTMGSVPNVGLMAQKAEE
YGSHDKTFQIKADGVVRVVDGKGNVVLEQNVEAGDIFRMCQTKDAPIQDWVKLAVNRARL
SNTPAVFWLDPARAHDGVMIEKVQKYLKDHDTTGLDIRILAPVDAIKFSLARIREGKDTI
SVTGNVLRDYLTDLFPIMELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQLVEENFL
RWDSLGEFLALAASLEHLGNTYDNPRAKVLANTLDQATGKFLDTNKSPSRKVGGIDNRGS
HFYLTLYWAEALAAQTDDAALQARFAPLAKTLAENEATIVAELNAVQGKPADIGGYYAPD
AELTAKVMRPSQTLNSAIAAL

NT seq 2226 nt +upstreamnt +downstreamnt
atgcccacccgttccaagatcatctataccttcaccgacgaagcccccgccctcgccact
tactcgctgctgccgatcatcgaagcgttcaccgcttcggctgacatcgctgtcgaaact
cgcgacatctccctggctggccgtatccttgccgccttcccggagcaactgggcgcagag
aagcaagtaggcgatcacctggcggaactgggccagctggctaccacccctgaagccaac
atcatcaagctgccgaacatcagcgcctcggtaccgcagctcaaagccgcgatcaaggaa
ctgcaaggcaagggcttcaacatccctgactacgccgacgagccggccaccgcggaagaa
aaagaatcccgtgcccgctacgaccgcatcaagggttccgccgtgaacccggtgctgcgc
gaaggcaactccgaccgccgcgcgccgctgtcggtcaagaactacgcccgcaagcaccca
cacaagatgggtgcctgggccgccgactccaagtcgcacgttgcccacatgacccagggc
gacttctacggcagcgaaaaagccgcgctgatcgaagctgacgacagcctgcgcatcgag
ctggtcggcaaagacggcagcaccaccgtgctgaaagaaaaaaccgccgtcaaagccgct
gaagtcatcgactgcgccaccatgagccgcaaggccctgaaagccttcatcgccgagcag
atcgccgatgccaaggccgctggcgtgctgctgtcggtgcacctgaaagccaccatgatg
aaggtctccgacccgatcatgttcggcgtcatcgtcgaagaattctacaacgacgtgctg
accaagcacgccgctgccctggccgaagtaggcttcaacgccaacaacggtatcggcgac
ctgtacgcccgcatcaaggacctgccagccgacaagcaggccgagatcgaagccgatatc
caggccctgtacgcagagcgcccggccctggccatggtcaactccgacaaaggcatcacc
aacctgcacgtgccgagcgacgtgatcgtcgacgcctcgatgccggccatgatccgtgac
tcgggcaagatgtggaacaccgcaggcgaactgcaagacgccaaggccgtgatcccggac
cgctgctacgccggcatctaccaggccaccatcgaagactgcaaggtcaacggtgccttc
gacccgaccaccatgggcagcgtgccgaacgttggcctgatggcgcaaaaagccgaagag
tatggctcccacgacaagaccttccagatcaaggctgatggcgtggttcgcgtagtcgat
ggcaagggcaacgtcgtgctggagcagaacgtcgaagccggtgacatcttccgtatgtgc
cagaccaaggacgcgccgatccaggactgggtcaagctggccgtcaaccgtgcccgcctg
agcaacaccccggcggtgttctggctggacccggctcgcgcccacgacggcgtcatgatc
gagaaggtgcagaagtacctgaaggatcacgacaccaccggcctggacatccgcatcctg
gcgccggtcgacgccatcaagttctccctggcccgcatccgcgaaggcaaggacaccatc
tcggtgaccggcaacgtgctgcgtgactacctgaccgacctgttcccgatcatggaactg
ggcaccagcgccaagatgctgtcgatcgtgccgctgatgaacggcggtggcctgttcgaa
accggcgccggcggttcggctccgaagcacgtgcaacagctggttgaagagaacttcctg
cgttgggactcgctgggtgaattcctggccctggccgcttccctggagcacctgggcaac
acctacgacaacccgcgcgccaaggttctggccaacaccctggaccaggctaccggcaag
ttcctcgacaccaacaagtcgccgtcgcgcaaagtcggcggtatcgacaaccgcggcagc
cacttctacctgaccctgtactgggccgaagccctggctgctcagacggacgacgctgcc
ctgcaggcacgcttcgcaccactggcaaaaaccctggccgagaacgaagcgaccatcgtc
gccgagctcaacgccgttcagggcaagccagccgacatcggcggctactacgccccggat
gccgagttgaccgccaaggtgatgcgcccaagccagaccctgaacagcgccatcgctgcc
ctgtaa

All links

Pathway (9)   
   KEGG PATHWAY (7)   
   KEGG MODULE (2)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (29)   

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