KEGG   Pandoraea pnomenusa 3kgm: U875_12095
Entry
U875_12095        CDS       T02936                                 
Name
(GenBank) excisionase
  KO
K01647  citrate synthase [EC:2.3.3.1]
Organism
ppk  Pandoraea pnomenusa 3kgm
Pathway
ppk00020  Citrate cycle (TCA cycle)
ppk00630  Glyoxylate and dicarboxylate metabolism
ppk01100  Metabolic pathways
ppk01110  Biosynthesis of secondary metabolites
ppk01120  Microbial metabolism in diverse environments
ppk01200  Carbon metabolism
ppk01210  2-Oxocarboxylic acid metabolism
ppk01230  Biosynthesis of amino acids
Module
ppk_M00009  Citrate cycle (TCA cycle, Krebs cycle)
ppk_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
ppk_M00012  Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:ppk00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    U875_12095
   00630 Glyoxylate and dicarboxylate metabolism
    U875_12095
Enzymes [BR:ppk01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.3  Acyl groups converted into alkyl groups on transfer
    2.3.3.1  citrate (Si)-synthase
     U875_12095
SSDB
Motif
Pfam: Citrate_synt HTH_17 MerR_1 MerR Sigma70_r4_2 AbiEi_4 HTH_23 HTH_8 DUF6236 HTH_29
Other DBs
NCBI-ProteinID: AHB06022
Position
complement(2632062..2633267)
AA seq 401 aa
MNYFTAAQAAERLGVSLQTLYAYVSRGLLHAEPGKTHRERRYRVADVERLAAQRTRGRKP
REVAKAALDWGMPVLESSITLIEDGRCYYRGRDALTMAESTSVEATAAWLWQCDEATAFA
AREDRECGPDDWPALLLDRYRGQRAESALLPAFTVASDDTATGIWQRDATRVARGSAELL
RLMTACLLGTTPSDAPVHEQCAHAWGVRDASGADLIRMALVLCADHELNASSFTARCVAS
TGASLRAAVVAGLSALTGGRHGGTTARNEAMWDEVGETHVAARLRERLARGEKLPGFGHH
LYPAGDVRASAMLARVLPSHPTWQTMIEAADTLVGQRPSLDFALVAVRRHLGLPVGSAFG
LFALGRTIGWIAHALEQRESTRLIRPRAAYVGVRPAPISRV
NT seq 1206 nt   +upstreamnt  +downstreamnt
atgaactacttcaccgccgcacaggccgccgagcgtcttggcgtgtccctccagacgctt
tatgcctacgtaagccgtggattgcttcacgccgagcccggtaaaacgcaccgcgagcgc
cgctatcgcgtcgccgatgtcgagcgtctggcggcgcaacgcacccgtggtcgcaagccc
agggaggtcgccaaggcggcgttggactgggggatgccggtgctcgagtcctcgatcacg
ctgatcgaggacggacgatgctactaccgggggcgtgatgccctgacgatggcggagtcg
acctcggtcgaagccacggcggcgtggttgtggcaatgcgacgaggcaacggcgttcgcc
gcgcgcgaggaccgcgaatgcggcccggacgattggcccgccttgctgctcgatcgatat
cgcgggcaacgtgccgaatcggcgttgctgccggcatttacggtcgcgagcgacgatacc
gccacaggcatctggcagcgcgatgcgacgcgtgtcgcgcggggaagcgccgaactgctg
aggttgatgacggcctgcctgctgggcaccacgccgagcgacgcccccgttcacgagcaa
tgcgcgcacgcgtggggcgttcgcgatgcgtcgggggcggatctgattcgcatggcgctg
gtgctgtgtgccgatcacgagttgaacgcgtcgagctttacggcgcgttgcgtggcatcg
acgggcgccagcctgcgcgcggcggtcgtcgccggtctgtcggcgctgaccggggggcgt
cacggcggcaccaccgcgcgcaacgaggcgatgtgggatgaggtgggcgagacgcacgtt
gccgcgcgcctgcgagagcggctcgcgcgtggtgagaagctgcctggcttcgggcatcac
ctttatccagccggtgatgttcgcgcgagcgcgatgcttgcgcgggtgctgccgtcgcac
ccgacatggcagaccatgatcgaagcggccgacacgttggtcgggcagcgcccgtcgctc
gatttcgcgctggtggcggtgcggcgtcacctcgggctgccggtgggctcggcgttcggc
ctgttcgcgctgggccgcaccattggctggatcgcccatgcgcttgagcaacgcgaaagc
acccgcttgattcgcccgcgcgcggcgtacgtgggcgtaagacccgcgccgatctcccgc
gtgtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (12)   
   KEGG PATHWAY (8)   
   KEGG MODULE (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (41)   

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