KEGG   Pandoraea pnomenusa 3kgm: U875_20945Help
Entry
U875_20945        CDS       T02936                                 

Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
ppk  Pandoraea pnomenusa 3kgm
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:ppk00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    U875_20945
Enzymes [BR:ppk01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     U875_20945
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     U875_20945
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(4567946..4568776)
Genome map
AA seq 276 aa AA seqDB search
MPELPEVEVTRRGIAPHVAGTRVARIDVRNASLRWPVPDGLDARLRGETLIGVTRRGKYL
LLEYAPGWLLVHLGMTGTLRVMPEPHALPAAGVHDHIDLVFEHCALRYRDPRRFGAVLFH
PRASGDVLLHPLLASLGVEPLTDAFDGAWLHAGTRGRTVSIKQALLAGSIVVGVGNIYAS
ESLFRARIHPRMPAGKLTRPRAGKLAAAVKEVLAAAIEKGGSTLRDFVGSDGKSGYFQQE
YFVYDRAGLPCRVCGTPIRQIVQGQRSTFFCPHCQK
NT seq 831 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaactcccagaagtcgaagtcacccgccgcggtatcgcgccgcatgtggcgggc
acgcgtgtcgcacgcatcgacgtgcgcaacgcctcgctgcgctggccggtacccgacggg
ctggacgcacgcctgcgcggcgagacgctcattggcgtgacccgtcgcggcaagtacctg
ctgcttgaatatgcgcccggatggctgctcgtgcatttgggcatgaccgggacgttgcgt
gtcatgcccgagccgcacgcattgccagcggccggcgtgcacgaccacatcgatctggtc
ttcgagcactgtgcactgcgttatcgcgacccccggcgcttcggcgccgtgctgtttcat
ccgcgcgcctcgggcgatgtgcttctgcacccgctgctcgccagtctgggagtcgagccg
cttaccgacgctttcgatggcgcctggctgcatgccggcacgcgggggcgaacggtctcc
atcaagcaggcgctgctcgcgggtagcatcgtggtgggtgtgggcaacatctacgcttcg
gagagcctgtttcgcgcgcgcattcatccgcgcatgccggcgggcaagctcacgcgcccg
cgcgccgggaaactcgccgcggccgtcaaggaagtgctcgccgccgccatcgagaagggc
ggcagtaccttgcgggacttcgtcggcagcgacggcaaaagcggctatttccagcaggaa
tatttcgtctacgatcgcgccggcctgccgtgccgggtgtgcggcacgccgatccggcag
atcgtgcaggggcagcgctccacgttcttctgcccccattgccagaaatag

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