KEGG   Paenibacillus polymyxa SC2: PPSC2_15215
Entry
PPSC2_15215       CDS       T01335                                 
Symbol
metS
Name
(GenBank) methionyl-tRNA synthetase
  KO
K01874  methionyl-tRNA synthetase [EC:6.1.1.10]
Organism
ppm  Paenibacillus polymyxa SC2
Pathway
ppm00450  Selenocompound metabolism
ppm00970  Aminoacyl-tRNA biosynthesis
ppm01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:ppm00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    PPSC2_15215 (metS)
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    PPSC2_15215 (metS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:ppm01007]
    PPSC2_15215 (metS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ppm03016]
    PPSC2_15215 (metS)
Enzymes [BR:ppm01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.10  methionine---tRNA ligase
     PPSC2_15215 (metS)
Amino acid related enzymes [BR:ppm01007]
 Aminoacyl-tRNA synthetase
  Class I (U)
   PPSC2_15215 (metS)
Transfer RNA biogenesis [BR:ppm03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    PPSC2_15215 (metS)
 Prokaryotic type
   Other AARSs
    PPSC2_15215 (metS)
SSDB
Motif
Pfam: tRNA-synt_1g tRNA-synt_1 tRNA_bind tRNA-synt_1e Anticodon_3 Anticodon_1 tRNA-synt_1f DUF6756
Other DBs
NCBI-ProteinID: ADO57209
UniProt: E3E501
Position
complement(3417783..3419801)
AA seq 672 aa
MSSENTFYITTPIYYPSDKLHIGHAYTTVAGDAMARYKRLRGYEVRYLTGTDEHGQKIEQ
KASAAGKTPQRFVDDIVAGIQDLWRKLDISNDDFIRTTEERHKAVVQEIFDRLLKQGDIY
KGEYEGWYSIPDETYYTETQLVDVVKDAEGNVTGGKSPDSGHPVELVKEESYFFRMSKYA
DRLLQFYEENPQFIQPESRKKEMINNFIKPGLEDLAVSRTTFDWGVKVKGDPKHVVYVWI
DALSNYITALGYGSSNTELYDKFWPANVHIVGKEIVRFHTIYWPIMLMALDLPLPKKVFA
HGWLLMKDGKMSKSKGNVVDPVTLIDRYGLDQLRYYLLREVPFGADGTFTPESFVDRVNS
DLANDLGNLLNRTVAMVDKYFDGKVPAYEANVTSFDAALVDMATSTYSKVEEAMENMEFS
VALTAISQFISRSNKYIDETQPWNLAKDEEKRSELASVMVHLVESLRIASILLQPFLTRA
PHQIWEQLGIRQGELTTWDSGKQFGRIPEGTQLVKGNPIFPRLDSEQEVAFIVEAMTGGK
KPEEAATQAQPLNASKASQEAPEAKEEIGIEDFAKVELRVAQVVACEPVKKADKLLKLQL
DLGYEQRQVVSGIAKFYTPEDMIGRKVICVTNLKPVKLRGELSQGMILAASHGDQLTLAT
VPEGMPNGAIVK
NT seq 2019 nt   +upstreamnt  +downstreamnt
atgtctagtgagaacacattttacattacaacaccgatctattatcccagtgacaagcta
catataggtcatgcctacacgacggtagcgggtgatgcgatggctcgctataagaggcta
cggggctatgaggttcgttatttgacaggaacggatgagcatggtcagaagattgagcaa
aaggcaagtgcagctgggaaaacgccgcaacgtttcgtagatgacattgtggcaggtatc
caagacctgtggcggaagcttgacatttccaatgacgattttatccgtactacggaggaa
cgtcataaggctgtcgtacaggaaatctttgatcgtttattaaaacaaggcgatatttac
aagggagaatatgaaggttggtacagcattcctgacgagacttactacacagaaactcaa
ctcgttgacgtagtgaaggacgctgaaggcaatgtcactggaggtaagagcccagatagt
ggacaccctgtagaactagtcaaggaagagagctactttttccgcatgagcaagtatgct
gatcggttgctgcaattttatgaagagaacccgcagtttatccaaccggaatcccggaaa
aaagaaatgattaacaacttcatcaagccggggctagaggatctggctgtttcccgtaca
acgtttgattggggagttaaggttaagggggacccgaagcatgtcgtatacgtgtggatt
gacgcactttccaactacatcacagccttggggtatggctcttctaatactgagctgtac
gataaattttggccagcaaatgtgcatatcgtaggtaaagagattgtacggttccacacg
atatattggccaatcatgctgatggcactggatcttccgttgcctaaaaaagtatttgca
catggttggttactcatgaaagatggtaaaatgtcgaaatctaaaggcaatgtggtagac
ccggtaacgttgattgaccgttatggtctggatcaacttcggtactacttgctgcgcgag
gtgccatttggagcggatggaacattcacacctgaaagttttgtagatcgtgtaaattca
gatttggccaatgatctgggcaacttgttgaatcgtactgtagcgatggtagacaaatat
tttgacggtaaagttcccgcttatgaagccaatgttacctcattcgacgcagctttggta
gatatggcgacatcgacttatagtaaagttgaagaagctatggaaaatatggaattttcc
gtggctttaacggcgattagccaatttattagccgcagcaacaagtatattgacgagact
caaccgtggaatctggctaaggatgaggaaaaacgtagcgaattggcatctgttatggtg
catttggtagaaagcttgcgtattgcttccattttacttcagcctttcttgacacgtgcg
cctcaccaaatttgggaacaactcggtattcgtcaaggagagctgactacatgggatagc
ggtaagcaatttgggcgtattccagaaggaacgcagttggttaaagggaatccgatcttc
cctcgtctggactctgagcaagaggttgcttttattgtagaagcaatgactggaggtaag
aaaccggaggaagctgcgacacaagctcaaccgctgaatgcatctaaggcgagccaggaa
gcaccagaggcgaaagaagagattggcattgaggattttgccaaggtagagctgcgcgtt
gctcaggttgtcgcctgtgagcctgtgaagaaggctgataaactgttaaagctacagctc
gatcttggctatgagcagcggcaggtggtatcgggaattgcgaaattttatacacctgaa
gatatgattggacgcaaggtgatctgtgtcacaaatcttaagccagtaaaacttcggggt
gagctgtcgcagggtatgattttggcagcatcacatggggatcagcttacattggccact
gtaccggaaggtatgccgaatggtgcaattgtaaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (31)   

Download RDF
DBGET integrated database retrieval system