KEGG   Paenibacillus polymyxa SC2: PPSC2_19050
Entry
PPSC2_19050       CDS       T01335                                 
Symbol
trmU
Name
(GenBank) thiouridylase
  KO
K00566  tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
Organism
ppm  Paenibacillus polymyxa SC2
Pathway
ppm04122  Sulfur relay system
Brite
KEGG Orthology (KO) [BR:ppm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04122 Sulfur relay system
    PPSC2_19050 (trmU)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ppm03016]
    PPSC2_19050 (trmU)
Enzymes [BR:ppm01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.1  Sulfurtransferases
    2.8.1.13  tRNA-uridine 2-sulfurtransferase
     PPSC2_19050 (trmU)
Transfer RNA biogenesis [BR:ppm03016]
 Prokaryotic type
  tRNA modification factors
   Thiolation factors
    PPSC2_19050 (trmU)
SSDB
Motif
Pfam: tRNA_Me_trans tRNA_Me_trans_C tRNA_Me_trans_M NAD_synthase ATP_bind_3 Asn_synthase ThiI Arginosuc_synth QueC
Other DBs
NCBI-ProteinID: ADO58039
UniProt: E3E6H0
Position
4295419..4296546
AA seq 375 aa
MTMAKANHETRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDEFGRCTAEEDAE
DVRRVCEQIDIPYYTVNFEKEYFDKVFSYFLDEYKAGRTPNPDVMCNREIKFGEFLNKAL
DLGADYVATGHYARVVEEDGRFTLLRGVDSNKDQTYFLNALSQAQLSRTMFPIGHLPKPE
VRRIAEAAGLYTAKKKDSTGVCFIGERNFKEFLSGYLPAKGGDMVDIATGEVKGRHDGLM
YYTLGQRQGLGIGGSGSGEPWFVADKDLEKNILYVVQGDRHHSLYSTSLIATDVNWIEGA
DARPSGEFRCTAKFRYRQPDQQVTLQWLPDGTVHVVFDIHQKAITPGQAVVFYDGERCLG
GGTIDKVEKLQPETV
NT seq 1128 nt   +upstreamnt  +downstreamnt
atgaccatggctaaagccaatcatgaaacccgtgtcgtcgtcggcatgtccggtggcgtc
gactcatccgttaccgcgctgctgctaaaggagcagggctatgacgtaatcggcatcttc
atgaaaaattgggatgacacggatgaatttggccgttgtacggctgaagaggatgcggag
gatgtgcgccgcgtctgtgaacagatcgacattccttactatacagtcaattttgaaaaa
gaatacttcgataaagtattctcctattttcttgatgaatataaagctggacgcacaccc
aatccggatgtcatgtgcaaccgtgaaattaaattcggcgagtttctgaacaaagcgctg
gatttgggagcagattatgttgctactggacattatgcacgggttgtggaagaagacggc
cgctttactttgctgagaggtgtggatagcaacaaggatcagacttatttcctgaatgca
ttaagccaagcacagttgtcgcgcaccatgttcccgatcggccatctgccgaaaccagaa
gtacgcagaattgcagaagctgcgggactttatacagccaagaaaaaagacagcacaggt
gtatgttttatcggcgaacgcaatttcaaggagtttctgagtgggtatctgcctgcaaaa
ggtggagatatggtggatatcgctacgggtgaagtcaaaggacgtcacgatggtctgatg
tactatacactgggccaaagacaaggcttgggcattggcggctcaggttcaggcgaacca
tggttcgtagcagataaagatttggagaagaatatcctgtatgtggtacaaggtgatcgt
caccacagcctgtattctaccagcctgattgccacggatgtaaactggattgaaggcgca
gatgcacgtccatccggcgaattccgctgcacagccaagttccgctaccgccagcctgat
cagcaagtaactttacaatggcttccggatggaaccgtgcatgtcgtattcgatatacat
caaaaggccattacccctggacaagctgttgtattttatgacggggaacgttgtctgggt
ggcggaaccattgataaggttgaaaaacttcagcctgaaacagtttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (27)   

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