KEGG   Paenibacillus polymyxa SC2: PPSC2_c2917Help
Entry
PPSC2_c2917       CDS       T01335                                 

Definition
DNA-(apurinic or apyrimidinic site) lyase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
ppm  Paenibacillus polymyxa SC2
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:ppm00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    PPSC2_c2917
Enzymes [BR:ppm01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     PPSC2_c2917
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     PPSC2_c2917
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(3097588..3098406)
Genome map
AA seq 272 aa AA seqDB search
MPELPEMENYRILLSKQILDIPITGVTVSREKSINTEVETFKKQLLGATVVYLERRGKHL
IFHLNTGKRLVLHLMLGGLLYLGTEEQRPDRTIQIELDFSGVKLYFIGLRLGYLHLLTAK
ETDEALSDLGPDPLDRRMTLENFTARLKGRRGILKTTLVNQQVFSGIGNCYSDEIAYIAG
FTPGSKVQNIVQSPEKVEKLYHATQSVLREATAEGGYMEMPLMEGDTLTGGFDHQCRVYD
REGEESPSGGKIVRVELAGKKAFYCPVQQHDA
NT seq 819 nt NT seq  +upstreamnt  +downstreamnt
atgccggaacttcctgaaatggaaaactacagaatcttattgtcaaaacaaattttggac
attccgattactggagtgacggttagccgcgaaaagtccattaatactgaagtggaaacc
tttaaaaagcaattgctgggtgcaaccgttgtatatttagagcgtcggggtaagcatttg
atttttcatttaaacacgggtaaacgacttgtgcttcatctaatgttgggaggactgttg
tatctgggaacggaggagcaacgtccagaccgtacgattcagatcgaattggattttagc
ggagtgaagctttattttatcggactgcgcttaggttatctgcacttgctgacggctaaa
gaaacagatgaagctttgtcagacctgggaccagatccgttagaccgtcgtatgacgttg
gagaattttacagcacgtctaaaaggacgacggggaattttgaaaacaacactggtaaat
cagcaggttttttcggggattggaaactgctattcggacgaaattgcttatatcgccgga
tttacaccgggttccaaggtacaaaatattgtacagtctccagaaaaagtggaaaagcta
tatcatgctactcaatccgtacttcgtgaagctactgcggagggcggttatatggaaatg
cctctaatggagggagacacgctaacaggtggctttgatcatcagtgtcgagtatatgac
cgtgaaggagaagaatctccaagcggtgggaaaattgtaagagtcgagctggcgggaaaa
aaagcattttattgcccggtgcagcagcatgatgcctaa

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