KEGG T01362: Palpr

Paludibacter propionicigenes: Palpr_0579

Entry

Palpr_0579 CDS T01362

Definition

glycoside hydrolase

Orthology

K01190

beta-galactosidase [EC:3.2.1.23]

Organism

ppn Paludibacter propionicigenes

Pathway

ppn00052	Galactose metabolism
ppn00511	Other glycan degradation
ppn00600	Sphingolipid metabolism
ppn01100	Metabolic pathways

Class

Metabolism; Carbohydrate metabolism; Galactose metabolism [PATH:ppn00052]
Metabolism; Lipid metabolism; Sphingolipid metabolism [PATH:ppn00600]
Metabolism; Glycan biosynthesis and metabolism; Other glycan degradation [PATH:ppn00511]

SSDB

Motif

Pfam:

Bgal_small_N Glyco_hydro_2_C Glyco_hydro_2_N Glyco_hydro_2 Laminin_G_3 Laminin_G_2 Bac_rhamnosid_N

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

699056..702808

AA seq 1250 aa
MKKIVGLVITLASFTASAQQSKFSNVYSFIENTAVFEINQTEGHTVCIPSKSVGEALNLQ
KSKSENVLSLNGKWKFHFANTPEGTPNNFFASNFNDQKWSEITVPSNWEMQGFGDPFFRN
VAQPFRSNPPFVPREYNPTGSYRKSFTLPANWKGKHIFLRMEKTASASFVWVNGQEVGYN
EGAQEPAEYDVTSFLKPGKNTIAVNVIKYSDGVYLESQDYWRLAGIFDDVWLFAKSDVHI
FDWHATTDLDENYKNAKLNLQITVNNQSKTDKQNYKVRTSLFNAQNVLVQNFTSDAVQIT
ADNKQIINISSEVLNPKKWTAETPNLYKLTLELINGEGKTEEVIAGRIGFKETEIRHQVF
YLNGKAIKLNGINSHMQHPDLGHTMDEATIRKDFEILKQFNINCVRTSHYPPVSRYLELA
DEYGLYIIDEAGDEAHATEYLSDRTEWVPMYRERVRKMVLRDRNHASILFWSAGNESGEG
KNICDVIDEGKKYDSTRSWMYGGNAFSHPCEEIIGPRYPSPFELKNQVGMIPESVDPRPS
FMDEYLSVAGNAGGGLDEYWDVIYQYPRIMGGAIWDFVSPGLHEPVRKLTDSSPNNVPTN
IMGRAKLVAGHDGKGIDLNGHDQWVEVYQDKNIEISGNELTVSFWIFPRDLMKTGGTLLT
KGNYQFGLQQIGDKSLDFYIYTSRKTVVSAELPKDWIQNWHHVAGIYDGKSISLFIDNKK
VAEKPVTGKITNFPFPLNIGKNAETQGQHLSSYLCDAIIDQVGIFPKAIEINDLFAAKPD
LKNSAALWLDFEQEQKEGEFFSYGIGARTYGSIWPDRRVEPEMWQMKKSAQPISVKWSNA
EKMEIEVQNRNFFTNTNAFDARWNLEENGITIASGKLEVDVEAEAKKIYVLPITKPQLKA
GATYLVTVSFHSKEAAQWAPKGFELYWDQLEMPWIVPADKKLVQHQTNSLKVTNNEQQLI
VSGVNFDYSFNKADGQLYSMKYMGTELLKQGAQLNVWRAPLANEQDDWTAGSGRAEGYGR
MVANSWYAIGLDKMKSKLESFRVENKTENVIVSIRTIDLFGNAGNAGFENEMIYTITPDG
EISLQHTINPNGRMPPSLPRIGTKWVFNDQMQNVEWFGRGPQENYPDRKTGYRIGRYKTT
VDEMFMPYLIPQDCGLRTDNKWVTLSNKDGIGIEFSADKSFNFNCYNYTTENLSKAKYTY
QLVKSDGVTFNFDYQTTGVGCTAIGVLNKYQTLPQAIQFTSSIKPFKINK

NT seq 3753 nt +upstreamnt +downstreamnt
atgaaaaaaatagttggtttagttatcacgctagcaagttttacagcctccgcacagcaa
tcgaaattttcgaacgtttattctttcatagaaaatacagcggtatttgaaatcaaccag
actgaaggtcacacggtttgtattccttcgaaatcggttggtgaagcattaaatcttcag
aaatcgaagtcagaaaatgtgctttcgttgaatggaaagtggaaattccattttgccaat
actcccgaaggtacacccaacaactttttcgcatccaattttaatgatcagaaatggtct
gaaattacagttccgtccaactgggaaatgcagggttttggcgatccttttttccgaaat
gttgcacaaccgtttcgctccaatccgccttttgttccccgcgaatacaacccaaccgga
tcctatcgcaaatcgtttacgttaccggcgaactggaaaggcaaacacattttcttgcgc
atggagaaaaccgcttcggcatcgtttgtctgggttaacggacaggaagtgggctacaac
gaaggtgcacaagagcctgccgaatatgatgtgactagtttcctgaaaccgggaaaaaat
accattgccgtcaacgtaattaaatattcagatggtgtgtacctcgaaagtcaggactat
tggcgcctggctggtattttcgacgatgtttggttgtttgcaaaatcggatgtacatatc
tttgactggcatgccactaccgacttagacgaaaactataagaacgcaaaactgaatttg
cagattacggtaaataatcaatcgaaaaccgataaacagaactacaaggttcgcacttcg
ctgtttaatgcacaaaatgtattggttcagaactttacttctgatgcagttcaaataact
gctgataataagcaaattattaatatttcatcagaagtattaaatcctaaaaagtggacc
gctgaaacgcctaatctctacaagttaacgctggaattaatcaatggcgaagggaaaacc
gaagaggtaattgccggtcgcattgggtttaaagagactgaaattcgccatcaggttttc
tatctgaacggaaaagccattaaactgaacggtattaactcgcacatgcaacatcccgat
ttggggcacaccatggacgaagccaccattcggaaagactttgaaatactaaaacaattc
aatatcaattgtgtgcgaacttcacattatccaccggtttcaaggtatctggagttggcc
gacgaatatggattgtatataattgacgaagcaggagatgaagctcatgcaactgaatat
ctaagtgatagaactgaatgggtgcccatgtaccgcgagcgggttcgcaaaatggtgttg
cgcgaccgtaatcatgccagtattctgttttggagcgccggaaatgaaagtggcgaaggg
aaaaatatttgtgacgtgattgatgaaggaaagaaatacgacagtacacgtagctggatg
tatggaggaaatgctttttctcacccttgcgaagagattatcgggccacgttacccttca
ccttttgaactcaaaaaccaagtggggatgattcctgaaagtgttgatccgcgaccctcg
tttatggacgaatacctttcggtggccggaaatgccggtggtggactggacgaatattgg
gatgtgatttaccagtatccacgcattatgggcggagcaatctgggatttcgtgagtccg
ggcttgcacgagcccgttcgcaaattgacagattcctcaccaaacaatgtaccaactaac
atcatgggacgcgccaaactagttgccggacacgatggcaaaggtattgatctgaatggt
cacgatcagtgggtggaagtgtatcaggataaaaatattgaaatctcgggtaatgaacta
acggtttcgttttggatttttccacgcgatttaatgaaaacgggtggaacactgctcacc
aaaggaaactatcaatttggcttgcagcaaattggtgacaaatcactcgatttctatatc
tacacttcgagaaaaacagttgtcagtgctgaattacccaaagattggatacaaaactgg
catcatgtggcaggtatttatgacgggaaatctatatcactatttatcgacaataaaaag
gtggctgaaaaaccggttaccgggaaaattaccaattttcctttcccacttaatattggt
aagaatgccgagacacaaggtcagcatttatccagttatttatgcgatgccattattgat
caggtaggcattttcccaaaagcgattgaaatcaatgatttatttgcagcaaaacctgac
ttgaaaaatagtgctgctttgtggctcgattttgaacaggagcaaaaagaaggcgagttt
ttcagctatggaattggagcacgtacctacggcagcatctggcccgaccgccgtgtagag
cctgaaatgtggcaaatgaaaaagtcggctcaacccatttctgtaaagtggagcaatgcc
gaaaaaatggaaattgaagttcagaaccgaaacttttttaccaatacgaatgcttttgat
gcacgttggaatttggaagaaaatggaatcacgattgcttccggaaaattggaggtggat
gtcgaagcggaagcaaaaaaaatctacgttcttcctatcacaaagcctcagctaaaagcc
ggtgcaacctatttggtaacagttagttttcattcgaaagaagctgcacaatgggcgcca
aagggttttgaactgtattgggatcaattggaaatgccatggattgttcctgccgataaa
aaattggtgcagcatcagaccaattcgttgaaagtaacaaataatgagcaacagttgatt
gtatccggagtaaatttcgattattcctttaataaagccgatggacaactgtactccatg
aaatacatgggtacagaattgctgaaacagggagcgcaactgaatgtttggcgtgcccct
ctggcaaacgaacaggacgactggaccgctggttcaggcagagccgagggctacggaagg
atggttgctaattcatggtatgccattggtttggataagatgaagtcaaaacttgaatca
tttcgggttgaaaataagacagaaaatgtaattgtcagtattcgtactattgaccttttt
ggaaatgctggaaatgccggcttcgaaaatgagatgatttatacgattacgcccgacggt
gaaattagtttacagcacacgattaatccgaatggaagaatgcccccgtcgttgccacgc
atcggaacaaaatgggttttcaatgaccaaatgcaaaatgttgaatggtttggacgtggg
ccacaggagaattatcccgaccgcaaaaccggctatcggattggtcgctataaaactacg
gtggatgaaatgtttatgccttatttgattcctcaggattgtggattgcgtactgacaac
aagtgggtaacactatcaaacaaagatggcattggcatagaattttcggcagataaatcg
tttaatttcaattgctacaactacacaaccgagaatttatcgaaagcgaagtacacctat
cagttggtaaaatcggatggtgtaacatttaatttcgactatcaaactacaggggtagga
tgcacggcaataggggtgcttaataaatatcaaacccttcctcaggccatacagttcaca
agttcgataaaaccatttaaaatcaataagtaa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (6)   
   KEGG ENZYME (1)   
   KEGG REACTION (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-PPN (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (36)   

Download RDF

DBGET integrated database retrieval system