KEGG T01362: Palpr

Paludibacter propionicigenes: Palpr_1633

Entry

Palpr_1633 CDS T01362

Definition

glycoside hydrolase

Orthology

K01190

beta-galactosidase [EC:3.2.1.23]

Organism

ppn Paludibacter propionicigenes

Pathway

ppn00052	Galactose metabolism
ppn00511	Other glycan degradation
ppn00600	Sphingolipid metabolism
ppn01100	Metabolic pathways

Class

Metabolism; Carbohydrate metabolism; Galactose metabolism [PATH:ppn00052]
Metabolism; Lipid metabolism; Sphingolipid metabolism [PATH:ppn00600]
Metabolism; Glycan biosynthesis and metabolism; Other glycan degradation [PATH:ppn00511]

SSDB

Motif

Pfam:

Glyco_hydro_2_C Glyco_hydro_2_N Bgal_small_N Glyco_hydro_2 DUF3426

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(1944024..1947206)

AA seq 1060 aa
MFLIFINMFKRKTLFFSLVFAGMTSLGGIFAQNNAPIPPEIENPELLGINKEPYHATLMP
YANLQEALVAKRHASSLCQSLNGSWKFNWVPTPEKRPVDFYKPDFDVSGWKEIPVPSNWE
VQGYGTPFYRNLGYTIKKDYPHVMSEPDKNFTAYVERNPVGSYRREFNVPAEWTGRRNFI
TFDGVDCAFFLWVNGEKVGFSVNSRNAAEFDLTKYLKPGKNMIAVEVYQYSSGTWLEDQD
MFRLHGIFRNVTMWSAPQIHIRDFFALPDLDKDYKDATLDVTAKIRNYGGQTAKAQTLTA
TLYDKEGKEVAKGIATGAALKANQEEALKVKLQVTNPQKWTAETPNLYTVVLTNSEGEIL
SKKVGFRKIEIKGRVFTVNGVPIKLKGVNRHEHWSDVGHAVTEEQMIHDLQVIKQGNCNH
IRTSHYSDDPRWYELCDEWGIWLVAEANVECHGYDGRFDNEPTIKSAIIDRNVANIENFK
NSPSVIIWSLGNECGWGATPNFVAAMNAVKAMDPSRPIHYERFGTGKNNPADLDGRMYGT
AQDYARSAQDKSLTKPFYICEFVHAMFNSMGSLDEYSEVFDNNPEILGGAIWEYQDQGLW
NKRDPNHPVLAYGGGFGETPNDHYFIHKGVVSYDRSTEGNKVKPHYPEMKKAFQWIDTNL
SDPISGEISIRNKFQFISLSRFEATWSLTENGVEIAKGNINLNRPINARSTGRAFVPYKI
EHPKAGAEYYLRISYKQKEKTLWADKGFEVATAQFKLPINTPPVLEAKVTQSVKLVQNEQ
AATVSGKDFSVSFDKKTGFMSQLIKNGTNLLATDGAPKLHLWRAAHRTDDDWAYRQWDKF
GVTTLQYKPVDFKVEIVDNATVKVISTTKADGKEGFGVYHTATYVVKGDGTIKVDNQVKF
TGLPINLAKIGVRMLLDKKLDQMDFFGRGPFENYSDRKSAAEVGLYEIGVNEQYEYEKPM
ERGNHEEVRWAKLNGKDMPSLLVQSDEKLMQVAAIPYTDEQMNPVEYKIDLPASTSTVFT
VSTKTLGVGSNSCGPQPLDKFKVAAEDTSFSYTIKLLNTK

NT seq 3183 nt +upstreamnt +downstreamnt
atgtttctaatttttataaacatgttcaagagaaaaacattattctttagtttggttttt
gcaggaatgacctcattaggtggaatttttgctcaaaacaatgctccgattcctccggaa
attgaaaatcccgaattactcggcataaataaagagccgtatcatgcaaccttaatgcct
tatgccaatttgcaggaggctttagtcgccaaacgacatgcttcatcgctttgtcaaagc
cttaacggatcatggaaattcaattgggttccaacgcctgaaaaacgtccggttgatttt
tacaaaccagactttgatgtttcgggctggaaagaaattccggtgccttctaactgggag
gtacagggttacggtacgcctttttacaggaatttgggttataccattaaaaaagattat
ccacatgtaatgagcgaaccggataagaactttactgcttacgttgagcgcaatccggta
ggaagctatcgtagagagtttaatgttcctgcagaatggaccggtcgccgtaatttcatc
acgttcgatggagttgattgtgcttttttcttatgggttaatggagaaaaagtaggtttt
agtgtcaacagccgcaatgctgcagaatttgatctgacgaaatacctcaagcccggtaaa
aatatgattgctgtggaggtatatcagtatagttcgggtacctggctcgaagatcaggat
atgttccgtcttcacggaattttccgcaatgtaactatgtggagtgctccacagatacat
atccgcgacttttttgctttgccagatttagataaagactataaggatgcaacacttgat
gtaacagcaaaaatccgaaactacggtggtcagacagctaaagctcaaactttgactgcc
actttgtatgacaaagagggcaaagaagtggctaaaggcattgcaacaggtgcggctctt
aaggcaaatcaggaagaagcgctgaaggtaaaacttcaagtgactaatcctcagaagtgg
acagccgagactccaaatttatatactgttgttcttactaattcggaaggagaaatattg
tctaaaaaagtaggtttccgcaaaatagaaattaaaggacgagttttcaccgttaatggt
gtgcctatcaaattgaaaggggtgaaccgacacgaacattggtcggatgtgggtcacgct
gttaccgaagaacaaatgattcatgaccttcaggtgataaaacagggaaactgtaatcac
atacgaaccagtcactattccgatgatcctcgttggtacgagctttgcgatgagtgggga
atctggttggtggccgaagccaatgtagaatgccacggatatgacggccgttttgataac
gaacctaccataaaatcagctattattgatagaaatgtggctaatattgaaaacttcaag
aatagtccgtcagtaattatttggtcattgggtaatgaatgcggatggggtgctactcct
aattttgtagccgccatgaatgccgtgaaggcaatggatccttccagaccaattcattac
gaacgttttggaacaggcaaaaacaatccggctgatttggatggtcgtatgtatggaact
gcgcaggattatgcgcgtagcgctcaggacaaatctctcacaaaaccattttatatttgt
gagtttgttcatgccatgttcaattctatgggttcgcttgacgagtattcggaagttttt
gataacaatcctgaaattttgggaggtgctatttgggaataccaagatcagggcttgtgg
aacaaacgcgatcctaatcatcctgtattagcatacggaggtggttttggcgaaacacca
aacgatcattactttatccacaaaggtgttgtgtcttacgatcgttctaccgaaggaaat
aaagtgaaaccacattatcctgaaatgaaaaaagcatttcaatggattgacacaaaccta
tctgatcctatttcaggagaaatttctattcggaataaatttcaatttatttctttgagc
agatttgaggcaacttggagtttgacagagaatggtgtagagatagccaaaggcaatatt
aatctgaatcgtcctatcaatgctcgtagcacaggcagagcatttgttccttataagata
gaacatccaaaagcaggagccgaatattatttgcgcatttcgtataagcaaaaagaaaag
acgctttgggctgacaaaggatttgaagtagctaccgctcaatttaaacttccaattaat
acccctccggtgttggaagctaaagtaactcagtccgtaaaactggttcagaatgagcag
gctgcaactgtttcaggtaaagatttttcagtaagcttcgacaagaaaacaggctttatg
agtcagttaatcaaaaacggaacaaatctgttggctaccgatggtgctccaaaattgcac
ttgtggcgtgcagctcaccgtactgacgatgactgggcttacagacaatgggataaattt
ggggtaaccacccttcaatataagccggttgattttaaagtggagattgttgacaacgca
actgtaaaagttatttcgacaacaaaagccgacgggaaagaaggatttggagtttaccat
actgcaacttatgtggtaaaaggtgatggaacaataaaggtagataatcaggttaaattt
accggtttgccaattaatctggctaaaataggtgtgcgcatgttgctcgacaaaaaactt
gatcagatggatttctttggccgtggtccgttcgaaaattattcagatcgcaagagtgct
gctgaagttggtctttatgaaattggagtaaacgaacagtatgaatacgaaaaacctatg
gagcgtggcaaccacgaagaagtacgttgggctaagctaaacggtaaggatatgccttcg
ttattggttcaatcggatgaaaaactaatgcaagtggctgctattccttatacggatgaa
caaatgaatccggtagagtacaaaatagatttgcctgcaagcacatcaactgtgttcacc
gtttctacaaaaaccctgggcgttggttctaacagttgtggtccacagccgcttgacaaa
ttcaaagtagctgctgaagatacttcttttagctacactataaaattgctaaatacaaaa
taa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (6)   
   KEGG ENZYME (1)   
   KEGG REACTION (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-PPN (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (34)   

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