KEGG   Paludibacter propionicigenes: Palpr_1892
Entry
Palpr_1892        CDS       T01362                                 
Name
(GenBank) primosomal protein N'
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
ppn  Paludibacter propionicigenes
Pathway
ppn03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ppn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Palpr_1892
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppn03400]
    Palpr_1892
Enzymes [BR:ppn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Palpr_1892
DNA repair and recombination proteins [BR:ppn03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Palpr_1892
SSDB
Motif
Pfam: PriA_3primeBD DEAD ResIII PriA_CRR Helicase_C PriA_C nSTAND3 BetR AAA_19 Castor_Poll_mid ATPase_2 TrmB zinc-ribbons_6
Other DBs
NCBI-ProteinID: ADQ80031
UniProt: E4T5N7
Position
complement(2299552..2302011)
AA seq 819 aa
MKYVDVILPLPLPNTFTYSVPEEWADSVRIGMRVVVPFGKKKMYTAVVYLVHTVMPTVYE
AKDIVCLLDNAPILRRPQMKFWEWISSYYQAFLGDVYQAAVPAGLKLESETRVCINPDYE
AETVLSEKEEKVLMALSDGKPTTVLELNKVTEMRDVMPTLKALLDKGAVEISEELTDKFR
VKTDTFVRMSAEAMQEDNLRKIFDDLGRAKKQLDVLMMYIDLSKCLIPAKYREVSRKELM
EKSGASAAVLAGLVERGVLETYLKEIGRLDISDVSTSAVYPLNEFQQVAIKEIEKQFIEK
PVVLLHGVTSSGKTEIYIHLINKVLAEGKQVLYLVPEIALTTQLTTRLKRVFGKRLGVYH
SKFSDAERVEIWNNVLNDKTYDVIIGVRSSIFLPFRQLGLIIVDEEHESSYKQYDPAPRY
HARNAAIVLASMHAAKTLLGTATPAIETYQNAQTGKFGLVELSQRHEDMAMPEILVVDTK
EAYRKKQMESHFTDTLLERIAKALQNKEQVILFQNRRGYAPYIECKACAYVPHCKNCDVS
LTVHKAFNTLTCHYCGYTEPIPNICPACKMPGTLSTKGFGTEKIEDEIKQIFPDARVSRM
DLDTTRSKKSYEKIISDFEQHKVDILIGTQMVSKGLDFERVSLVGILNADNMLNFPDFRA
HERAFQLMAQVSGRAGRKNKRGTVILQTSSPEHPIIGQVIRNDYQAMFATQCDERKLFKY
PPYFRIIQIVLRHRDSIILNQAAARMAVDLRAVFNNRVLGPNVPAVSRIQNMYIKHILLK
FEVEASAEKAKDILRQVTTNLQSEPKFKSLWINLDVDPM
NT seq 2460 nt   +upstreamnt  +downstreamnt
atgaaatacgtcgacgtcatattgccattgccattgcccaatacttttacctactccgtg
ccggaagaatgggcggattcggtgcgtattggtatgcgggtggtggtgccgtttggaaag
aaaaagatgtacactgctgtggtatatctcgttcacacggtgatgcctacggtttacgaa
gccaaagatattgtgtgtctgctggataatgcgcccattctacgtcgtccgcaaatgaag
ttttgggaatggatttcgtcctactatcaagcctttctgggcgatgtgtatcaggctgca
gtgccggccggtttaaagttggaaagcgaaacgcgggtatgcatcaatcccgattacgaa
gccgaaaccgttctttcggaaaaagaagaaaaggttcttatggctttgtccgacggcaaa
cctactacagttctcgagctgaataaagtcaccgaaatgcgcgacgtgatgccgaccttg
aaagcattgttggataaaggtgcagtagaaatcagcgaagaactgaccgataagtttcgg
gtgaagaccgatacctttgtgcgcatgtcagccgaagctatgcaggaagataatctccgc
aagatttttgacgatctcggtcgtgccaaaaagcaactggatgtgctgatgatgtatatt
gatctgtcaaaatgcctcatccctgcaaagtatcgcgaagtttcgcgcaaagagctgatg
gaaaaatcgggagcctcggctgcggtgcttgccggactggtggagcggggcgtattggaa
acttacctgaaagaaatcggacgattggatatttccgatgtgtcgacttctgccgtttat
ccgcttaatgaatttcagcaggtagccattaaagaaatagaaaagcaatttattgaaaaa
ccggtggtgctgttgcacggtgttacgtccagcggcaaaaccgaaatttacatacatctt
attaataaggtgctcgccgaaggtaaacaagtgctttatcttgttcccgaaattgccctg
acaacccaacttactacgcgcttgaagcgggtgtttggtaaacgccttggagtgtatcac
tccaaattctccgatgccgaacgggtggagatatggaacaatgtacttaatgataaaacc
tacgacgttataataggcgtgcggtcgtccatctttcttccttttcgtcagctcgggttg
attattgtggacgaagagcatgagtcgagttacaaacaatacgatccggctccgcgctat
catgcccgcaatgccgccatcgtattggcatccatgcacgctgcaaaaaccttgctcgga
acagctacccctgccatagaaacctatcagaacgcgcaaaccggaaagtttggcttggta
gagcttagtcagcgtcatgaagatatggctatgcccgaaattcttgttgtcgataccaaa
gaagcgtacaggaagaaacaaatggaaagccatttcaccgacaccttgctcgaacgtatt
gccaaagcgcttcagaataaagagcaggttatcctttttcaaaatcgtcgggggtatgca
ccctatatagaatgtaaagcttgtgcctatgtaccgcattgcaaaaactgcgatgtaagt
ctcacggttcataaagcttttaataccctgacttgccattattgcggatataccgaaccg
attccgaatatctgtccggcttgtaaaatgcccggaacactttccacgaagggttttgga
acggaaaagatcgaagacgaaatcaaacagatttttccagatgcacgtgtttcgcgtatg
gatttagatacaacccgttccaaaaagtcgtatgaaaagatcatttccgactttgaacaa
cataaagtcgatattcttattggtacccaaatggtgtcgaaagggctcgatttcgagcgc
gtaagccttgtcggaattctcaatgccgacaacatgctcaattttccggattttcgcgcg
cacgagcgcgcgttccaattaatggcgcaagtcagcgggcgtgcaggaaggaaaaataaa
cgtggtacggtcattcttcaaacttcgtcgccggagcatcccattatcgggcaagttatc
cgaaatgactatcaagctatgtttgccacgcagtgcgacgagcggaagctattcaaatat
cctccgtatttccgcattattcagatcgtccttcgccatcgcgactcgattattctcaat
caggcggcggctcggatggccgtcgatttacgggcggtattcaataatcgtgtactagga
ccaaatgttccggctgtatcacgtatacaaaatatgtatatcaagcatattttgcttaag
tttgaagtggaagcatccgccgaaaaggcaaaagatatccttcgtcaggtcaccactaat
ctgcagtccgaacccaagtttaaatctttatggataaatctggatgtggatccgatgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (45)   
   KEGG ORTHOLOGY (1)   
   RefGene (42)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (65)   

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