KEGG   Paludibacter propionicigenes: Palpr_2154
Entry
Palpr_2154        CDS       T01362                                 
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
ppn  Paludibacter propionicigenes
Brite
KEGG Orthology (KO) [BR:ppn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppn03019]
    Palpr_2154
   03009 Ribosome biogenesis [BR:ppn03009]
    Palpr_2154
   03036 Chromosome and associated proteins [BR:ppn03036]
    Palpr_2154
Enzymes [BR:ppn01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     Palpr_2154
Messenger RNA biogenesis [BR:ppn03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     Palpr_2154
Ribosome biogenesis [BR:ppn03009]
 Eukaryotic type
  90S particles
   RNase
    Palpr_2154
 Prokaryotic type
  rRNA processing factors
   Palpr_2154
Chromosome and associated proteins [BR:ppn03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     Palpr_2154
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DevR
Other DBs
NCBI-ProteinID: ADQ80290
UniProt: E4T6E6
Position
complement(2620936..2621769)
AA seq 277 aa
MIKNILLKIRLLSKARKEPYLLFHKVLGFYPDKIEYYQLAVRHKSVSIPTENGRNLSNER
LEFLGDAVLNSVVTDILYRRYKEEREGFLTNTRSKIVKRDSLNKLALEIGLDKLVKVTKY
VNAHTNNNIYGNALEALLGAIYLDYGYKKCKKFVEQRLFKSFVNLDKVAENEVNFKSKLI
EWCQKNKLETEFILLSETMSGSNKHVFLSGLMIQGQKICEASGMSKKESQQNASRIAFEI
IESNPDILKELKSDQNQVPQENMSPPDQAIEFIDIQQ
NT seq 834 nt   +upstreamnt  +downstreamnt
gtgattaagaatattcttttaaaaataaggctcctttcgaaagctcgaaaagagccttat
ttgttattccacaaagtactcggtttttatcctgataaaattgagtattatcaattggcg
gttcgtcataagtccgtatccatccctaccgaaaacggacgcaacctgagcaacgaacga
ctggaatttctgggagatgctgtgcttaattctgttgtaacagacatcctttacagacgc
tacaaagaggaacgtgaaggtttcctgaccaatacaagatcaaaaattgtaaagcgtgac
tcgctcaacaagctggcacttgaaattgggctggacaaactggttaaggtcacaaagtac
gtcaacgcacacaccaacaacaatatttacggaaatgcacttgaggcattattgggtgct
atatacctggactacggctataagaaatgcaaaaaatttgtagagcaacgcttgttcaaa
agttttgtaaatcttgataaagtagccgaaaatgaagtcaattttaaatcgaaactgata
gaatggtgtcagaaaaataaacttgaaacagaatttatcctcctgagcgaaaccatgagc
ggctccaataaacatgttttcttgtcgggcttaatgattcagggacaaaaaatatgtgaa
gcgagcggaatgagtaaaaaggaatctcaacagaatgcctcgcgaatcgcttttgaaata
atcgaatcaaatccggatatcctgaaagaattaaaatccgaccagaatcaggtaccgcaa
gaaaatatgtctcctcccgaccaagctattgaattcattgatattcaacaataa

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Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (31)   

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