KEGG   Pandoraea pnomenusa DSM 16536: LV28_06820
Entry
LV28_06820        CDS       T03411                                 
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
ppnm  Pandoraea pnomenusa DSM 16536
Pathway
ppnm00260  Glycine, serine and threonine metabolism
ppnm00460  Cyanoamino acid metabolism
ppnm00630  Glyoxylate and dicarboxylate metabolism
ppnm00670  One carbon pool by folate
ppnm00680  Methane metabolism
ppnm01100  Metabolic pathways
ppnm01110  Biosynthesis of secondary metabolites
ppnm01120  Microbial metabolism in diverse environments
ppnm01200  Carbon metabolism
ppnm01230  Biosynthesis of amino acids
ppnm01240  Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:ppnm00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    LV28_06820 (glyA)
  09102 Energy metabolism
   00680 Methane metabolism
    LV28_06820 (glyA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    LV28_06820 (glyA)
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    LV28_06820 (glyA)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    LV28_06820 (glyA)
Enzymes [BR:ppnm01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     LV28_06820 (glyA)
SSDB
Motif
Pfam: SHMT Aminotran_1_2 Beta_elim_lyase Aminotran_5 Cys_Met_Meta_PP
Other DBs
NCBI-ProteinID: AIU26291
UniProt: A0A378YHN3
Position
1639072..1640319
AA seq 415 aa
MFDKSKSTVAAVDPDVWAAIQKENQRQEDHIELIASENYTSPAVMEAQGSQLTNKYAEGY
PGKRYYGGCEYVDVVEQLAIDRVKALFGAEAANVQPNSGSQANQGVYFAMLKPGDTIMGM
SLAHGGHLTHGSPVNMSGKWFNVVSYGLNENEDIDYDAAEKLAQQHKPKMIVAGASAFAL
KIDFERMARIAKSVGAYFMVDMAHYAGLIAAGVYPNPVPHADFVTTTTHKSLRGPRGGVI
LMKAEFEKAINSAIFPGIQGGPLMHVIAGKAVAFKEAATPEFKAYQEQVVKNARVLAETL
VKRGLRIVSGKTESHVMLVDLRAKNITGKAAEAALGEAHITVNKNAIPNDPEKPFVTSGV
RLGSPAMTTRGFKEAEAELVGNLIADVLDNPENAETLATVRAKVAELTKRFPVYG
NT seq 1248 nt   +upstreamnt  +downstreamnt
atgttcgacaaatcgaaatccaccgttgccgccgtcgatcccgacgtgtgggccgcgatt
cagaaggaaaaccagcgtcaggaagaccacatcgagctgatcgcgtcggaaaactacacc
agcccggccgtgatggaagcgcagggctcgcaactgaccaacaagtatgcggaaggttat
ccgggcaagcgctattacggtggttgcgagtatgtcgacgtggtcgaacaactggcgatc
gatcgggtgaaggcgctgttcggtgccgaggccgcgaacgtgcagccgaactccggctcg
caggccaaccagggcgtgtacttcgccatgctcaagccgggcgacacgatcatgggcatg
agcctcgcccacggcggtcacctcacgcacggctcgccggtcaacatgtcgggcaagtgg
ttcaacgtggtgagctacggcctgaacgagaacgaagacatcgattacgacgctgccgag
aaactcgcgcagcaacacaagccgaagatgatcgtggcgggcgcatcggccttcgccctg
aagatcgacttcgagcgcatggcgcgcatcgccaagtcggtcggcgcctatttcatggtc
gacatggcgcactatgccggcctgatcgccgcgggcgtgtacccgaaccccgtgccgcac
gccgatttcgtgacgaccaccacgcacaagagcctgcgcggcccacgcggcggtgtgatc
ctgatgaaggccgagttcgagaaggccatcaattcggcgatcttcccgggaatccagggt
ggcccgctcatgcacgtgatcgccggcaaggccgtcgcgttcaaggaagccgccacgccg
gaattcaaggcgtatcaggaacaagtcgtgaagaacgcacgcgtgctggccgagacgctg
gtcaagcgtggcctgcgcatcgtgtcgggcaagaccgaatcgcacgtgatgctggtcgac
ctgcgcgccaagaacatcaccggcaaggctgccgaagccgcgctgggtgaagcgcacatc
accgtcaacaagaacgccattccgaacgatccggaaaagccgttcgtgacgagcggcgtg
cgtctgggctcgccggccatgaccacgcgtggcttcaaggaagctgaagccgagctggtc
ggcaacctgatcgccgacgtgctggacaacccggaaaacgccgaaacgctggccacggtc
cgcgccaaggtcgccgagttgaccaagcgcttcccggtctacggctaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (15)   
   KEGG PATHWAY (11)   
   KEGG MODULE (4)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (37)   

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