KEGG   Pandoraea pnomenusa DSM 16536: LV28_13705
Entry
LV28_13705        CDS       T03411                                 
Symbol
putA
Name
(GenBank) transcriptional regulator
  KO
K13821  RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
Organism
ppnm  Pandoraea pnomenusa DSM 16536
Pathway
ppnm00250  Alanine, aspartate and glutamate metabolism
ppnm00330  Arginine and proline metabolism
ppnm01100  Metabolic pathways
ppnm01110  Biosynthesis of secondary metabolites
Module
ppnm_M00970  Proline degradation, proline => glutamate
Brite
KEGG Orthology (KO) [BR:ppnm00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    LV28_13705 (putA)
   00330 Arginine and proline metabolism
    LV28_13705 (putA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ppnm03000]
    LV28_13705 (putA)
Enzymes [BR:ppnm01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.88  L-glutamate gamma-semialdehyde dehydrogenase
     LV28_13705 (putA)
  1.5  Acting on the CH-NH group of donors
   1.5.5  With a quinone or similar compound as acceptor
    1.5.5.2  proline dehydrogenase
     LV28_13705 (putA)
Transcription factors [BR:ppnm03000]
 Prokaryotic type
  Ribbon-helix-helix
   Other families
    LV28_13705 (putA)
SSDB
Motif
Pfam: Aldedh Pro_dh Pro_dh-DNA_bdg PutA_1st PRODH
Other DBs
NCBI-ProteinID: AIU27444
UniProt: A0A378YP39
Position
complement(177679..181593)
AA seq 1304 aa
MANTTLGVKVDDVLRTRLKTAAQQIERTPHWLIKQAIFAYLERIESGALPPELSGATQSG
TEVIEGHASDDAVPHPFLEFAQNVQPQSVLRAAITAAYRRPEPECVPVLVGQAKLAPSTA
TQASDLARKLVVALRGKSTGGGVEGLIHEFSLSSQEGVALMCLAEALLRIPDKATRDALI
RDKISKGDWHAHMGNSPSMFVNAATWGLMITGKLVTTTSEAGLTKALTRLIGRGGEPLIR
KGVDIAMRLMGEQFVTGETISEALANSRKYEAQGFRYSYDMLGEAATTEEDAQRYYASYE
QAIHAIGKASAGRGIYEGPGISIKLSALHPRYSRSQHERTVAELLPRVQSLAKLARSYDI
GLNIDAEEADRLEISLDLLEALCFDPELAGWNGIGFVVQAYQKRCPFVIDFIIDLARRSR
HRIMVRLVKGAYWDTEIKRAQVDGLEGYPVYTRKIYTDVSYLACAKKLLAVPDAIYPQFA
THNAYTLSAIYHLAGNNYYPGQYEFQCLHGMGEPLYEEVVGPIASGKLARPCRVYAPVGT
HETLLAYLVRRLLENGANTSFVNRIADETVSVDELIADPVTEAEKVQPLGAPHAKIPLPR
DLYGTSRANSSGFDLSNEHRLASLSSALLASAGTPWRAAPMLADGERTTGTPRPVRNPAD
LRDTVGQVIEATSDDVQAALAHAVAAAPIWQATPVEERADCLMRSADLLEAHMPTLMGLC
VREAGKSLPNAVAEVREAVDFLRYYAAQIRQGFSNDTHRPLGPVLCISPWNFPLAIFVGQ
VAAALAAGNPVIAKPAEQTPLIAAEAVRLMQAAGVPAGALQLLPGTGETVGAALVADART
KAVMFTGSTEVARIIARTLAERLDANGRPIPLIAETGGQNAMIVDSSALPEQVVYDVLAS
AFDSAGQRCSALRVLCLQDDIADKTLHMLKGAMQELAIGNPDRLSIDVGPVIDAEAQGGI
NRHIEQMRAKGFPVEQLPLPEAARHGTFVPPTLIELTDLKALQREVFGPVLHVIRFKRAQ
LDKLLDQINGTGYGLTFGVHTRIDETIAYVTERAHVGNVYVNRNVIGAVVGVQPFGGEGL
SGTGPKAGGPMYLPRLLATRPAALAPELNRNDAALSPLVSYRDWLHRQSDSAAAIDRVDR
YLATSALDATAVLPGPTGERNTYGLAPRGPVLCVAATPLGARTQLAAVLATGNTAVFADS
PAARELVSALPDTLKARASVLAAGTDAAGEPSLAAVLFEGDSDELLALNRRIATRNGPIL
STQGLSPEALSAGDDYSLERLLCERSVSVNTAAAGGNANLMTIG
NT seq 3915 nt   +upstreamnt  +downstreamnt
atggcaaacaccacgcttggcgtcaaggtcgacgacgtcctccgcacgcggctcaagacg
gccgcccagcaaatcgagcgcaccccgcactggctcatcaaacaggccatcttcgcctat
ctcgagcgtatcgagagcggcgcattgccgcccgaactcagtggtgcaacccaatccggt
accgaggtgatcgagggccacgccagcgacgacgccgtgccgcatcccttcctcgaattc
gcccagaacgtgcaaccgcagtcggtgctgcgcgccgcgatcacggcggcctatcgccgt
cccgagccggaatgcgtgccagtgctggtcggccaggccaagctggcgccgtcgaccgcc
acgcaagcctccgacctcgcccgcaagctggtcgtcgcgctgcgcggcaagagtacgggc
ggtggcgtggagggcctgatccacgagttctcgctgtcgagccaggaaggcgtggcgctg
atgtgtcttgccgaagcgctgctgcgcattcccgacaaggccacgcgcgatgccctcatt
cgcgacaagatcagcaagggcgactggcacgcccacatgggcaattcgccctcgatgttc
gtcaatgccgccacctggggcctgatgatcaccggcaagctcgtgacgacgaccagtgaa
gcgggcctcacgaaggcgctcactcgcctgatcggccgcggcggcgaaccgctcatccgc
aagggcgtggacatcgccatgcgcctgatgggcgagcagttcgtgacgggcgaaaccatc
tccgaagcgcttgccaacagccgcaagtacgaagcccagggcttccgctactcgtacgac
atgctcggcgaggccgcgacgaccgaggaagacgcccagcgctactacgccagctacgag
caggcaatccatgcgatcgggaaagcctcggcgggccgcggcatctacgaaggccccggc
atctcgatcaagctctcggcattgcacccgcgctactcgcgcagccagcacgagcgtacc
gttgccgaactgttgccgcgcgtgcagtcgcttgccaagctggcccgctcgtatgacatc
ggcctgaacatcgacgccgaagaggccgaccgcctcgagatctcgctcgacctgctcgag
gcgctctgcttcgacccggaactcgccggctggaacggcatcggcttcgtggtgcaggcg
tatcagaagcgctgcccgttcgtgatcgacttcattatcgatctcgcccggcgcagccgg
catcgcatcatggtgcgcctggtcaaaggcgcctattgggatacggaaatcaagcgcgca
caagtcgacggcctggaaggctatccggtgtacacgcgcaagatctacacggacgtgtcg
tacctcgcctgcgcgaagaagctgctcgccgtgccggatgcgatctacccgcagttcgcc
acgcacaacgcctacacgctctccgccatctatcacctcgcgggcaacaactactacccc
ggccagtacgaattccagtgcctgcacggcatgggcgagccgctgtacgaggaagtcgtc
ggccccatcgcgtcgggcaagctcgcgcggccgtgccgggtgtatgcgccggtcggcacg
catgaaacgctgctcgcctacctcgtgcgccgtctgctggaaaacggcgccaacacgtcg
ttcgtgaaccgcattgccgacgagaccgtcagcgtcgacgaactgatcgccgatccggtg
acggaagccgagaaggtgcaaccgctgggggcgccgcacgcgaagattccgctgccgcgc
gatctttacggtacctcgcgcgccaattcgtcgggcttcgatctgtccaacgaacatcgt
ctcgcctcgctgtcgtcggcgctgctcgcgagcgccggcacgccgtggcgcgccgccccg
atgctcgccgatggcgaacgcacgaccggcaccccgcgtccggtacgcaacccggccgat
ctgcgcgacaccgtcggccaggtgatcgaggcgacctcggacgacgtgcaagccgcattg
gcccacgccgtggccgccgcgccgatctggcaggccacgccggtcgaggaacgcgccgac
tgcctgatgcgctcggccgacctgctcgaagcccatatgcccacgctcatgggactgtgc
gtgcgcgaagccggcaagtcgctgccgaacgccgtggccgaagtgcgcgaagcggtcgac
ttcctgcgttactacgcggcgcagatccgtcagggcttctcgaatgacacgcaccgcccg
ctgggcccggtgctgtgtatcagcccgtggaacttcccgctcgcgattttcgtcggtcag
gtcgccgcggcgctggccgccggcaacccggtcatcgccaagcctgccgagcaaacgccg
ctcatcgcggccgaggccgtgcgcctgatgcaggccgccggcgtgccggccggcgcgctc
caactgctgcccggcacgggtgagaccgtcggcgccgcactggtggccgacgcccggacc
aaggccgtcatgtttaccggctcgaccgaagtcgcacgcatcatcgcgcgcacgctggcc
gagcggctcgacgccaacggccgtcctatcccgctgatcgccgagaccggcgggcaaaac
gccatgatcgtcgactcgtcggccttgcctgaacaggtcgtgtacgacgtgctcgcgtcg
gccttcgattcggccggccagcgctgctcggcgctgcgcgtgctgtgcctgcaggacgat
atcgccgacaagacgctgcacatgctcaagggcgccatgcaggaactggcgatcggcaac
ccggatcgcctctccatcgatgtcggccccgtgatcgacgccgaagcgcagggcggcatc
aaccgtcatatcgagcagatgcgcgccaagggcttcccggtcgaacagttgccgttgccc
gaagccgcacgacacggcacgttcgtgccgcccacgctcatcgagctcacggatctgaag
gcactgcaacgcgaagtgttcggtccggtgctgcacgtgatccggttcaagcgcgcccag
ctcgacaagctgctcgaccagatcaacggcacgggctacggcctgacgttcggcgtgcac
acgcgtatcgacgaaaccatcgcctacgtgaccgagcgtgcacacgtcggcaacgtctac
gtgaaccgcaacgtgatcggcgccgtggtcggcgtgcagcccttcggcggcgaaggcctg
tctgggacaggtccgaaagcgggtggtccgatgtatctgccgcgcctgctcgccacgcgc
ccggccgcgctcgctcccgagctcaatcgcaacgacgccgccctctcgccgctggtgagc
tatcgcgactggctgcatcgtcagtcggacagcgccgccgcgatcgatcgcgtggatcgc
tatctggccacctcggcgctcgacgccacggccgtgctgccggggccgaccggcgagcgc
aacacgtacggactggcgccgcgcggtccggtgctgtgcgtggccgccacgccgctgggc
gcccgcacgcaactggctgccgtgctggcaacgggcaacacggcggtcttcgcggacagc
cccgccgcgcgtgagctggtgagtgcgctgcccgacacgctcaaggcgcgcgcctcggtg
ctggccgccgggaccgacgcggccggcgaaccatcgctcgccgccgtgctgttcgaaggc
gacagcgacgaattgctcgcgctgaaccgccgcatcgccacgcgcaacggtccgattctc
tcgacgcaaggcctctcgcccgaagccctctcggcgggcgacgactactcgctggagcgt
ctgctgtgcgaacgctcggtgtcggtgaacacggcggccgcgggtggcaacgccaacctc
atgaccatcggctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (15)   
   KEGG COMPOUND (15)   
Chemical reaction (10)   
   KEGG ENZYME (2)   
   KEGG REACTION (8)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (43)   

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