KEGG   Pandoraea pnomenusa DSM 16536: LV28_15450
Entry
LV28_15450        CDS       T03411                                 
Name
(GenBank) RNA polymerase-binding protein DksA
  KO
K06204  RNA polymerase-binding transcription factor
Organism
ppnm  Pandoraea pnomenusa DSM 16536
Brite
KEGG Orthology (KO) [BR:ppnm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ppnm03000]
    LV28_15450
   03021 Transcription machinery [BR:ppnm03021]
    LV28_15450
   03009 Ribosome biogenesis [BR:ppnm03009]
    LV28_15450
Transcription factors [BR:ppnm03000]
 Prokaryotic type
  Other transcription factors
   Others
    LV28_15450
Transcription machinery [BR:ppnm03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription elongation factors
     LV28_15450
Ribosome biogenesis [BR:ppnm03009]
 Prokaryotic type
  rRNA transcription factors
   LV28_15450
SSDB
Motif
Pfam: DksA_CC zf-dskA_traR HipN
Other DBs
NCBI-ProteinID: AIU27749
UniProt: A0A856LQG4
Position
complement(5168018..5168437)
AA seq 139 aa
MSKKRLLTEAEILKMGEKDYMNEEQLAFFKDRLENLQAEILRNAGQTTENLRETVVVPDP
ADRATIEEEHALELRTRDRERKLLKKVQQSLARIESGEYGWCEETGEPIGVPRLLARPTA
TLSLEAQERRELRQKLFGD
NT seq 420 nt   +upstreamnt  +downstreamnt
atgagcaagaaaagacttttgaccgaggccgaaattctgaagatgggcgagaaggactac
atgaatgaagaacaactcgccttcttcaaggatcgtctggaaaatctgcaagctgaaatt
ctgcgcaacgccggtcagacgaccgaaaaccttcgcgaaaccgtcgtcgtgccggatccc
gccgatcgcgccacgatcgaggaagagcacgctctggagcttcgcacccgcgatcgcgaa
cgcaagctgctgaagaaggtccagcagtcgctcgcccgcatcgagtccggcgaatacggc
tggtgcgaggaaaccggcgagccgatcggcgtgccgcgtctgcttgcccgtccgacggcc
acgctgtcgctcgaagcgcaggagcgccgcgaactgcgccagaagctgttcggcgactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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