KEGG   Pandoraea pnomenusa RB38: DA70_22785
Entry
DA70_22785        CDS       T03067                                 
Name
(GenBank) ethanolamine utilization protein
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
ppno  Pandoraea pnomenusa RB38
Pathway
ppno03030  DNA replication
ppno03430  Mismatch repair
ppno03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ppno00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DA70_22785
   03430 Mismatch repair
    DA70_22785
   03440 Homologous recombination
    DA70_22785
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppno03032]
    DA70_22785
   03400 DNA repair and recombination proteins [BR:ppno03400]
    DA70_22785
Enzymes [BR:ppno01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DA70_22785
DNA replication proteins [BR:ppno03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     DA70_22785
DNA repair and recombination proteins [BR:ppno03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     DA70_22785
SSDB
Motif
Pfam: RNase_T GIY-YIG DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: AHN76980
Position
3960388..3962235
AA seq 615 aa
MQDFAVDEANDSFREAPDPDALARSLPAAMVFVDLETTGGNALEDRITEIGVVEVGPHGI
EQWSTLLDPAEPIPPFIQQLTGITNEMVRGQPSFATLAQGLAERLHGKLFVAHNARFDYG
FLKNEFKRAGIAFQADVLCTVRLSRLLFPSAARHGLDALIARFGLTPLGRHRALADAELL
WQFWQKLHTIYTPELIEQAVQRVTKRSSQPPQLPDEAIDALPSRPGVYLFYGEGDTLLYV
GKSVDIRARVRSHFSSDHQVAKDLRISQEIRRVEARPTVGELGALLLESQLVKQLQPVHN
RMLRRASSLYSWQFPPDTDTPRLVSAKTVDFADAQALFGTFSSRTRAESALRALADEHRL
CCAQLGLEKIAPGRPCFGYQVKRCDGVCVGEASLEAHNERVREALATLQLETWPYDGPIA
IEEHGPGEHAAETAYHVIDRWQYLGSVTSADALDGLLERMPAVTGFDPDIYRLLGRRLAA
SATGHFAGKPGSVDNRRARSGRPVGTTGGVSGGAAVEGAVEGAVESMIERAAGSAAASAG
TGNEDAGRNGEARAPATRKPLAPLVVLRLIRPTFRLSPDDPPEAVAPKPRSMALQRRRQP
CPEDPAQLRLPFDAH
NT seq 1848 nt   +upstreamnt  +downstreamnt
gtgcaagatttcgcggtcgacgaggctaacgattccttccgcgaggcgccggatccggac
gcgctggcgcgctcgctgcccgcagcgatggtcttcgtcgatctcgagacaacgggcggc
aatgcgctggaggatcgcatcacggagatcggcgtcgtcgaagtcggcccgcatggaatc
gagcagtggagcaccctgctcgatccggccgagccaattccgcccttcatccagcaactc
acgggtatcaccaacgaaatggtgcgtggccagccgtctttcgccacgttggcgcagggg
ctcgccgaacgccttcacggcaagctgttcgtcgcgcacaacgcccgcttcgattacggt
tttctcaagaacgaattcaagcgcgcaggcattgcattccaggccgacgtcctttgcacg
gtgcgcttgtctcgccttctgttcccttcggccgcccgtcacgggctcgatgccctcatc
gcccgattcggcctcacaccgttgggtcgccaccgcgcacttgccgacgccgaactgctc
tggcagttctggcagaagctccacacgatctacacccccgagctgatcgagcaggccgtc
cagcgcgtcacgaagcgatcgagccaacctccccagttgccggacgaagccatcgacgcg
ctgccgagccgccctggcgtgtatctcttctacggcgaaggcgatacgcttctctacgtc
ggcaagagcgtcgacattcgcgcgcgggtacgctcgcatttctccagcgatcaccaggtc
gcgaaagacctgcggatctcgcaggagatccgtcgcgtggaagcccggccgacagtgggg
gaactgggggcattgctgctcgaatcgcagctcgtcaagcagttgcaaccggtgcacaac
cgcatgcttcgtcgcgcatccagcctctacagctggcaattcccgcccgacaccgatacg
ccgcgactggtgagcgcgaagaccgtcgacttcgccgatgcccaggcgttgttcggtacg
ttttcatctcgcactcgcgcggagagcgcccttcgtgcactggccgacgagcaccgcctt
tgctgcgcgcaactcggactcgagaagatcgcgcccggacgcccctgcttcggctatcag
gtcaagcgatgcgatggcgtctgcgtgggcgaggcgtcgcttgaggcgcacaacgagcgc
gtccgcgaggcgctcgccacgctgcaactggaaacgtggccgtacgacggccccatcgcc
atcgaagagcatggccccggcgaacacgcggccgagacggcctatcacgtcatcgaccgt
tggcagtatctgggcagcgtgacatccgccgacgccctcgacggtctgctcgaacgcatg
ccggccgtgaccggcttcgaccccgacatctaccggctgctcggcagacgtcttgccgct
tcggcgacgggtcacttcgccgggaagcccgggagtgtcgacaatcgccgcgcacgcagc
gggcgaccggtcggaacgaccgggggtgtctcgggaggcgctgctgttgagggcgccgtt
gagggcgcggttgagagcatgattgagcgcgcggcaggaagcgcggcggcgagcgcgggc
acgggaaatgaagatgccggccgaaacggcgaagcacgcgcaccggcgacgcgcaaaccg
ctcgcgccgctggttgtcctgcgcctcatccggccgacctttcggctgagtccggacgat
ccccccgaagccgtcgcgccaaaaccacgcagtatggcgttgcagcgtcgccgccagccg
tgtccggaagatccggcacagctgcgccttcccttcgacgcacactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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