KEGG   Paenibacillus polymyxa M1: PPM_2475Help
Entry
PPM_2475          CDS       T01968                                 

Gene name
rafA
Definition
alpha-galactosidase (EC:3.2.1.22)
Orthology
K07407  
alpha-galactosidase [EC:3.2.1.22]
Organism
ppo  Paenibacillus polymyxa M1
Pathway
Galactose metabolism
Glycerolipid metabolism
Sphingolipid metabolism
Brite
KEGG Orthology (KO) [BR:ppo00001]
 Metabolism
  Carbohydrate metabolism
   00052 Galactose metabolism
    PPM_2475 (rafA)
  Lipid metabolism
   00561 Glycerolipid metabolism
    PPM_2475 (rafA)
   00600 Sphingolipid metabolism
    PPM_2475 (rafA)
Enzymes [BR:ppo01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.22  alpha-galactosidase
     PPM_2475 (rafA)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
2925663..2927897
Genome map
AA seq 744 aa AA seqDB search
MASIQVNPKERTFHLTNKYCSYLFRVMENGQLEHLYYGKKMEYLGQYDRFIERSYRSVSV
GEFDGDLVTSLESIKQEFPSSGSGDFREPAVEIIQEDGSHVMEFIFDRYEVITEKPKIPH
LPATFCNEADEAETLLITLTDSLTGAVAVLAYTIFSELPVITRSVSITNSGNSVLRVNRL
MSMSLDLPDSEYEIIHLSGAWGRERHVERTPLRPGVQSIGSTRGISSHIHNPFLALAKPG
SQEHQGEIYAVNLVYSGNFLAQAEVDSYSTTRLSLGIHPDKFCWTLNPGECFYSPEAVMV
YSQSGLNGMSQAFHRLYNKHLIRSSWAERERPVLINNWEGTYFDFTEKKIVDMAKKASEL
GIELFVLDDGWFGQRNNDTSSLGDWFENREKLPNGISNLAKKINELGMKFGLWFEPEMVN
SDSHIMREHPDWVVGTPGRKRKHGRHQYVLDYSQPPVVDYLFKLMDDVLSSAHIEYVKWD
MNRCISEAYSLSLGKERQGEFFHRYVLGVYALYEKLITKYPEVLFESCASGGGRFDPGML
YYAPQTWTSDDSEAIERLKIQYGTSMAYPLSSMGAHVSTIPNHQVGRTAPLQTRSNVAYF
GVFGYELDPLALTEEECNIIKKQIQLYKRHQRLVTQGTFYRLLSPFEKNETAWMTVDAER
EHALVGWYQVLSRPNAAYSRLKLIGLDEMAVYFVEELDRRFTGSELMNIGLILTPPYKAD
QDFNIAEKYDFSSQLFTLTKETSS
NT seq 2235 nt NT seq  +upstreamnt  +downstreamnt
atggctagtatacaagttaacccaaaggaacgtacatttcacttaacgaacaaatactgc
agttaccttttccgtgtcatggagaacgggcaattggagcatttgtattatggcaaaaaa
atggagtacctaggtcaatatgaccgttttattgaacgaagctaccgctctgtgtctgtc
ggtgagtttgatggtgacttggtaacatcattggaaagcatcaagcaggaatttccttct
tcgggaagtggagactttagagaaccagcagttgagatcatacaggaggacggttctcat
gtcatggagttcatctttgaccgttacgaggtcatcacggagaaacctaaaatcccccat
ctccctgctacgttttgtaatgaagcagatgaagcagagacactcctgatcacgctgacc
gattcccttacaggagcggttgccgtgcttgcatacaccatcttcagtgaactgcctgta
atcacgcgatccgtatccataacgaattccggaaatagtgttctgagagtcaaccgtcta
atgagcatgagccttgatcttcctgactccgaatatgaaattattcatttgtcgggggca
tggggtagggaacgacatgtggagcgtacaccactcagaccaggtgttcagtccattggg
agcacacgaggaattagtagtcatattcacaatccattcttggcgcttgccaaaccggga
tctcaggaacaccaaggagaaatatatgcagtgaatcttgtctacagcggaaactttctt
gcccaggcggaagtggacagctactcaactacccgactgagcctcggtattcatcctgac
aaattctgctggactctgaatcctggagaatgtttttattcgcctgaagcagttatggtc
tactcacagagcggtttgaacggcatgagccaggcgttccatcgcctgtacaataaacac
ttaattcgtagtagctgggctgaacgggaacgacctgtattgatcaataactgggagggt
acctactttgattttaccgaaaagaaaatagtggatatggctaaaaaagcaagtgaacta
gggattgagctctttgtcttggatgacggttggttcggtcaaagaaacaatgatacctcc
tcactcggtgactggtttgaaaatcgtgaaaagctaccgaacggaatctcaaatttggca
aagaagatcaatgagcttggtatgaaattcggtctttggtttgagccggaaatggttaac
tccgactctcatattatgagggaacatccggattgggttgtgggaacacccgggcgtaaa
cgcaagcatggacggcatcagtatgttcttgattattcccaaccgcctgttgtggattac
ctgtttaagttaatggatgacgtgctctcttctgctcatatcgaatatgtaaaatgggat
atgaatcgctgcatttcagaagcctattcattatctctgggcaaggaaagacagggcgag
tttttccatcgttacgtcctaggcgtgtatgctttatatgagaagctgattaccaaatac
cctgaggttttgtttgagtcctgtgcttccggtggaggacgatttgatccagggatgctt
tattatgctccgcaaacatggacgagcgacgatagcgaagctattgaacgtcttaagatt
cagtatggcacttccatggcctatccgcttagcagcatgggtgctcatgtgtcaaccatt
ccgaaccaccaggtaggcagaaccgcaccgctgcaaaccagatcaaatgtcgcctacttc
ggtgtattcggttacgaacttgatccattagctttaaccgaggaagagtgcaatataatc
aaaaagcaaatacaactgtataaacgtcaccaacgattagttacccagggaacgttttac
cgtctgctaagtccctttgaaaaaaatgagacagcttggatgaccgttgatgcagaacgt
gagcatgctctcgtcggctggtaccaggtactctcacgccctaatgcagcttattcacgg
ctaaagctcatcggactggacgaaatggcagtatatttcgtggaagaactggatcgacgt
ttcacaggcagcgagttaatgaacatcggacttatactcaccccgccttataaggctgac
caggatttcaatattgcggagaaatatgatttctcatctcaattatttactctaactaaa
gagacttcctcgtga

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