KEGG   Paenibacillus polymyxa M1: PPM_3359
Entry
PPM_3359          CDS       T01968                                 
Symbol
murF
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanyl ligase
  KO
K01929  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
Organism
ppo  Paenibacillus polymyxa M1
Pathway
ppo00300  Lysine biosynthesis
ppo00550  Peptidoglycan biosynthesis
ppo01100  Metabolic pathways
ppo01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:ppo00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    PPM_3359 (murF)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    PPM_3359 (murF)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    PPM_3359 (murF)
Enzymes [BR:ppo01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.10  UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
     PPM_3359 (murF)
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C Mur_ligase APOBEC4_like
Other DBs
NCBI-ProteinID: CCI70168
Position
complement(3892663..3894066)
AA seq 467 aa
MKRTIGQIASMCGGTLHAEADAERMVEGVFTDSRRPQSLGLFVPLVGERFDGHHYVQQIV
SERGATAYLWQKDHGAPPTVNAIEVEDTLEALQHLAAAYLRETGVSVVGITGSNGKTTTK
DIVNALLGTTFKVHKTEGNYNNHIGLPLTVLSMPQDTDILVLEMGMSGRGEIRLLANIAQ
PDVAVITNIGESHLLQLGSRTEIARAKLEIASGIKPGGLLIYNGDEPLLPQVLAEPETVK
PEGLELFTFGLAADNDDYPTEITSDGEGSLFITAQSGQEAFRLPLLGQHNVVNGLAALAV
ARHFNVDADHIRKGLSSLKLTGMRIEVVKCSDGLTVLNDAYNASPASMKAAIQTLSAYKT
GGRKIAVLGDMLELGAEEKQFHEEIGRFAAKHNIEALFTYGALGASIAQGAQGTMPTANV
HAYTDKQKLIQHLRSYLHADDIVLVKASRGMRLEEIVDALKNGPLQN
NT seq 1404 nt   +upstreamnt  +downstreamnt
atgaaaagaacaatcggtcagattgcatccatgtgtggaggaacacttcacgcagaggcg
gacgccgaacggatggttgagggcgtttttacagactcacgcaggccgcagagtctggga
ctgttcgttccactcgtgggtgaacgatttgatggacatcattatgttcagcagatcgta
agcgagagaggggcaacagcatatttatggcaaaaggatcatggagcacctccgactgtc
aatgctattgaggtcgaggatacgttagaagctcttcagcatctagcagctgcatacttg
cgcgaaactggcgtttctgtcgttggaatcacgggaagcaacggcaagacgacgacaaaa
gatattgtaaatgctctattaggcacgacttttaaagtacacaaaaccgaagggaattat
aacaatcatatcgggttgcctttaacagtactgtccatgccgcaggatacagatatcctg
gttctggagatgggcatgagtggacgcggggaaatccgtctgctggctaatattgcccaa
ccagatgtagctgtcataactaacattggcgaatcgcatttacttcagcttggttctcgc
actgaaattgctcgtgcaaagctggaaatcgcaagtgggattaaacccggtggattgctt
atctataatggggatgaaccactacttccacaagtgttggcggagcctgaaacggtcaag
cctgaaggattagaattattcacgttcgggttagctgcggacaatgatgattatccaact
gaaatcacttcggatggagaaggtagcttattcataacagcccaatcaggccaagaggct
ttccggcttcccttgctcggacagcacaatgttgtaaacggattggcagcgctggcggta
gcacgtcatttcaatgtggatgcagaccatatacgtaaagggttgtcgtctttaaagctg
acgggcatgcgcattgaggtcgtgaagtgttcggatggacttaccgtgctaaatgacgct
tacaatgccagtcctgcttcaatgaaggctgcaattcagacgttgtctgcatataaaacg
ggtggacgtaaaatagccgtgcttggtgatatgctggagctgggcgctgaggaaaagcaa
tttcatgaagaaattgggcgttttgctgcaaagcataacatagaggcactgtttacctat
ggtgcattaggcgcttcgattgcgcagggtgcgcaagggacaatgccaactgctaacgta
catgcttatacagataagcaaaagctgatccagcatttgcggtcttatctccatgccgat
gatattgtgctggttaaggcatccagagggatgcgattagaagaaattgtggatgcgctg
aaaaacggtccgctacagaactga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (25)   

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