KEGG   Paenibacillus polymyxa M1: PPM_4361
Entry
PPM_4361          CDS       T01968                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
ppo  Paenibacillus polymyxa M1
Pathway
ppo00740  Riboflavin metabolism
ppo01100  Metabolic pathways
ppo01110  Biosynthesis of secondary metabolites
ppo01240  Biosynthesis of cofactors
ppo02024  Quorum sensing
Module
ppo_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:ppo00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    PPM_4361 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PPM_4361 (ribD)
Enzymes [BR:ppo01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     PPM_4361 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     PPM_4361 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: CCI71170
Position
complement(5028466..5029566)
AA seq 366 aa
MNTHEKYMRLALENARSAKGQTEPNPLVGSVIVNNGRIVGIGAHLKPGEPHAEIHALRMA
GEHAQGATIYVTLEPCSHHGRTGPCAEAIVKAGIRRVVIAALDPNPLVSGRGVQILKDAG
IEVIVGVCEQESIRMNEVFNQYIVNKRPFITIKSAVTLDGKIATRTSESKWITSEAARED
VHRLRHEHVGILVGVQTVIHDNPQLTTRLPEGRNPIRIILDSKLRIPLDARVITDGEAPT
WIFTGRTYDKGKRSQLEQLGVKVYPTQDEYSERVNLPQMLDILGAAEVSSVFVEGGAEVN
ASFVQQGLADKLVLYIAPKLVGGRSAPGFLGGEGVSAMSDAVALQDLSVTQVGVDWKIEG
YFERGK
NT seq 1101 nt   +upstreamnt  +downstreamnt
atgaacactcacgaaaaatatatgcgtctggcactggaaaatgccagaagtgccaaaggg
caaacagagccgaatccgctggttggatcagtcattgtcaataatggccgtatcgttggg
atcggcgctcatttgaagcctggcgagccccatgccgagattcatgcattgcgtatggca
ggggaacatgctcagggagcgacgatttatgtaacgctggagccatgttcccatcacggc
cggacaggcccgtgtgcggaagcgattgtgaaggctggcattcgtagggtggtgattgca
gcactggacccgaacccgctggtttctggcagaggggtacaaattttgaaagatgcaggc
attgaggtcatagtcggagtatgtgagcaggaatccatccgtatgaatgaagtgttcaat
caatatatcgtgaacaagcgtccttttattacgatcaaatcggcagtaacgctggacggt
aaaattgcaacgcgaacctctgaaagcaagtggatcacatctgaggctgcacgggaggat
gtgcatcgtcttcgtcacgagcatgtaggcatcctggtcggtgtacagaccgtgattcat
gataatcctcagcttacgactcgtctaccagaaggacggaatccgattcgtatcattctg
gatagtaagcttcgtattccattggatgctcgtgttattacagatggagaggcgcctacc
tggatattcacagggcggacttacgataaaggcaagcgaagccagctggaacagcttggt
gtgaaggtatatccgacacaggatgaatatagtgagcgggtcaacctaccgcaaatgctg
gacattctgggggcggcggaggtctcatcggtattcgtggaaggcggggccgaggtgaac
gcttcgttcgtgcagcaaggattggcagacaagctggtgttgtatatagcgccgaagctg
gttggagggcgctccgctccgggctttctcgggggagagggcgtgtctgcgatgagcgac
gcggtggcattgcaggacttgagcgtgacgcaggttggcgtggactggaaaatagaaggg
tattttgagcgaggaaaatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (28)   

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