KEGG   Pectobacterium polaris: BJK05_10560
Entry
BJK05_10560       CDS       T05195                                 
Name
(GenBank) ATP-dependent RNA helicase SrmB
  KO
K05590  ATP-dependent RNA helicase SrmB [EC:3.6.4.13]
Organism
ppoa  Pectobacterium polaris
Brite
KEGG Orthology (KO) [BR:ppoa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ppoa03009]
    BJK05_10560
Ribosome biogenesis [BR:ppoa03009]
 Prokaryotic type
  rRNA helicases
   BJK05_10560
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_11 CMS1 AAA_22
Other DBs
NCBI-ProteinID: ASY80424
UniProt: A0AA41URJ4
Position
2424853..2426178
AA seq 441 aa
MTVTNFSELDLDESLLDALRDMGYERPTVIQAEAIPPAMEGRDVLGSAPTGTGKTAAYLL
PVLQHLIDFPRKKSGPPRILILTPTRELAMQVADQARAFAAHTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW
RKQTLLFSATLEGDAIKDFAERLLNEPVEIESDPSRRERKKILQWYYRADDLKHKTALLC
HQLKQPDVTRSIVFVRKRERVHELVAWLREAGINSCYLEGEMVQAKRNEAIKRLSDGRVN
VLVATDIAARGIDINDVSHVFNFDLPRTSDTYLHRIGRTGRAGRKGCAISFVEAHDHLLL
GKISRYLNEPLKPRVIEELRPETKAPSAKTTGKPSKKVLAKRQEKKEKEKEKVKVKVRQR
DAKNVGKRRQPTQKTDEPSAK
NT seq 1326 nt   +upstreamnt  +downstreamnt
atgactgtaaccaatttttccgagcttgatcttgatgaaagcctgttagacgccctgcgc
gacatgggctacgagcgcccaaccgtgattcaggctgaggcgatcccgccggcgatggaa
ggccgcgacgtactgggctccgcgccaacaggaacaggtaaaaccgccgcctatctgctg
ccggttttgcagcatcttatcgatttccctcgtaaaaaatcgggtccacctcgtattctg
atcctcacgccaacccgtgaactcgccatgcaggtggccgatcaggcgcgggcgtttgca
gcgcatacgcacctggatatcgccacgatcaccggcggcgtggcctatatgaaccacgcg
gaagtcttcagtgaaaatcaggatatcgtcgtcgcgacgacgggccgtctgctgcaatat
attaaagaagaaaacttcgattgccgcgcggtagaaacgctgattctggatgaagcagac
agaatgctggacatgggcttcgctcaggatattgaacatatcgccggagaaacccgctgg
cgcaagcaaacgctgctgttttctgcgacgctcgaaggggacgcgatcaaagatttcgcc
gagcgcctgctcaacgaacctgttgaaatcgaatccgacccatcgcgtcgggaacgtaaa
aaaattctgcaatggtattaccgcgccgacgatctcaaacacaaaacggcactgctctgc
caccagttaaaacagccggacgtgacgcgttctatcgtctttgtacgtaagcgtgagcgt
gtgcatgagctggttgcctggctgcgtgaagcaggcattaactcctgctatctcgaaggc
gaaatggtgcaagccaaacgtaatgaggcgatcaaacgcctcagcgacgggcgtgtcaac
gtactggtagcaacggatatcgcggcacgcggtattgatattaacgatgtgagccacgta
tttaacttcgatttgccgcgcacatcggacacctatcttcaccgtattggccgtactggt
cgcgcgggtcgtaaaggctgtgctatctctttcgtcgaagcacacgaccatctgctactg
gggaaaatcagccgctacttgaatgaaccgctaaaaccgcgcgtcattgaagaactccgc
ccagagactaaagcaccaagcgctaaaacgacggggaaaccgtcgaaaaaagtgctagct
aagcggcaagagaagaaagagaaggaaaaagaaaaggttaaggtaaaagttcgccagcgc
gacgctaaaaatgtgggtaagcgtcgtcaaccaacgcagaaaactgacgaaccctctgcc
aaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system