KEGG T02956: X809

Paenibacillus polymyxa CR1: X809_31770

Entry

X809_31770        CDS       T02956

Name

(GenBank) ATP-dependent DNA helicase

K03655

ATP-dependent DNA helicase RecG [EC:5.6.2.4]

Organism

ppol Paenibacillus polymyxa CR1

Pathway

ppol03440

Homologous recombination

Brite

KEGG Orthology (KO) [BR:ppol00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    X809_31770
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppol03400]
    X809_31770
Enzymes [BR:ppol01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     X809_31770
DNA repair and recombination proteins [BR:ppol03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     X809_31770

SSDB

Motif

Pfam:

Helicase_C DEAD RecG_wedge RecG_dom3_C ResIII SecA_DEAD

Other DBs

NCBI-ProteinID:

AIW40606

Position

complement(3624006..3626054)

AA seq 682 aa
MLQLDQIPLKQIHGVSALKEGELHAFGISNIQDMLEYYPFRYEDYRLRSLSEVKDGDKIT
VQAKIMGIPVLQRYGRKSRLTCKLMAEDWMFTATWFNRHFMKEQLTSGREIVVTGKWDLK
RMQMTVADSEFPDKGVARSGTLQPVYSIGGKITQSWMRKTMSQTLQQFGEMIPEILPELL
VRKYSMMPRKQAIAGIHQPQDNREGQEARRRMVYEELFLFQLKMQAFRALNRGRADGVVH
TVDNATIREFVRALPFELTDAQKKVELEILHDLRSPYCMNRLLQGDVGSGKTVVAAIGLF
ATVRSGFQGALMVPTEILAEQHMRSLHKLFEPFGISVGLLTGSTTGKKRKELLAALQMGL
LDIVVGTHALIQEDVYFRQLGLVVTDEQHRFGVNQRSVLRRKGYNPDVLTMTATPIPRTL
AITAFGDMDVSTLSERPKGRIPISTYWVKHELMDRVLGFISREVDQGRQAYLICPLIEES
EKLDVQNAIDLHIQMQQAFPHYRVGLLHGRMTPAEKEEVMRSFYANEVQLLVSTTVVEVG
VDVPNATLMIIMDADRFGLSQLHQLRGRVGRGAHASYCVLIADPKSEVGQERMKVMTDTD
DGFEVARRDLDLRGPGDFFGTKQSGLPEFRLADMVADFEVLEKAREDATDLIKDSSFWTS
PQYEALRGYLQKEQIFQGDLID

NT seq 2049 nt +upstreamnt +downstreamnt
atgctgcaattggatcaaatacctttaaaacaaatacatggcgtgagtgctctcaaagag
ggagagcttcacgcttttggcatttctaacatacaggacatgctggaatattatccgttt
cggtatgaagattaccgactgcgctcgctaagcgaagtgaaggatggagataagattaca
gtacaggccaaaattatgggcattccggtgcttcagcgttacgggcgcaaatcaaggttg
acttgtaaattgatggccgaggattggatgtttaccgcgacgtggtttaatcggcatttc
atgaaggagcagctaacctctggtcgtgaaattgtggtgactggtaaatgggatctcaaa
cggatgcagatgactgttgcagattctgagtttcctgataaaggagtagcccgctcgggg
acacttcaaccggtgtactctataggcggcaagattacgcaaagctggatgcgaaaaaca
atgagccagacactccagcagtttggtgaaatgatccccgaaatattgcctgagttgctt
gtgcgtaaatatagtatgatgccgcgcaagcaggctattgcaggtatacaccagcctcag
gacaaccgcgaggggcaagaggctcgtcggcggatggtgtatgaggagctatttttattt
cagctgaaaatgcaggcattccgggcgctaaatcgtggtcgagcggacggggtggtacat
accgtggataacgccacgattcgtgaatttgtaagggctttgccttttgaattaacggat
gcacagaagaaggtagagcttgaaatactgcacgatctacgctcaccttattgtatgaat
cgtctgcttcagggagatgttgggtcgggtaaaacagttgttgctgccatcggtttattt
gccacagtacgttccggttttcagggagcgctgatggtgccaaccgaaatattggccgag
cagcacatgcgatcgcttcacaagctgtttgagccctttggaatcagtgtgggcctattg
actgggagtacaaccgggaagaagcgtaaggagctcctagctgctctccaaatgggtctg
ctggacattgtagtaggcacccatgctctcattcaggaggatgtatattttcgccagctt
gggcttgttgtaacggatgagcagcatagattcggagtgaatcagcgtagtgtactgcgt
cgcaaaggctataatcccgatgtgctgacgatgacggccacaccgatcccccgtacgctg
gccatcactgcgtttggcgatatggatgtttctacgttgtcagagcggccgaaggggcgt
attccaatttccacctattgggtgaagcacgaactgatggatcgggtacttggttttatt
tcccgcgaggtagatcagggacggcaggcttatctgatttgcccgttgattgaagagtcg
gagaagctggacgtacagaatgccatcgatttgcatattcaaatgcaacaggcttttcca
cattaccgcgttgggctattacatggacgaatgactcccgcagaaaaggaagaagttatg
cgttctttctatgcgaatgaggttcagttactcgtttcaacgacggttgtggaggtgggg
gtagacgttcccaatgcgacgctaatgatcattatggacgcggatcgttttgggctgtcc
cagttacatcaattacgtggacgtgtcggacggggagcacatgcctcgtattgtgtactg
atcgctgatcctaagtcggaggttggtcaggagcggatgaaggttatgaccgatacggac
gatggttttgaggtggctagacgcgatctggatttgagagggccgggtgacttttttggc
accaagcagagtgggctacccgagtttcgtttagcagatatggtagcggattttgaggtg
ctggaaaaggcgcgggaggatgcaaccgatctgattaaggattcgtccttttggacatct
ccgcagtatgaagcactgcgcggttatttgcaaaaagaacagattttccagggggatctc
atcgactaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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