KEGG   Physcomitrium patens (spreading earthmoss): 112281110
Entry
112281110         CDS       T01041                                 
Name
(RefSeq) tubulin alpha chain-like
  KO
K07374  tubulin alpha
Organism
ppp  Physcomitrium patens (spreading earthmoss)
Pathway
ppp04145  Phagosome
ppp04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:ppp00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    112281110
  09142 Cell motility
   04814 Motor proteins
    112281110
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppp03019]
    112281110
   03036 Chromosome and associated proteins [BR:ppp03036]
    112281110
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ppp04812]
    112281110
   04147 Exosome [BR:ppp04147]
    112281110
Messenger RNA biogenesis [BR:ppp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     112281110
Chromosome and associated proteins [BR:ppp03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     112281110
Cytoskeleton proteins [BR:ppp04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    112281110
Exosome [BR:ppp04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   112281110
  Exosomal proteins of other body fluids (saliva and urine)
   112281110
  Exosomal proteins of colorectal cancer cells
   112281110
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Other DBs
NCBI-GeneID: 112281110
NCBI-ProteinID: XP_024373068
Position
4:1163645..1165571
AA seq 451 aa
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKSVGGGDDAFNTFFSETGAGK
HVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS
VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA
SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP
TVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGAESAEDGGEDDGEEY
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgagagagtgcatttcgatccacatcggtcaggccggtatccaggtcggaaacgcctgc
tgggagctgtactgtttggagcatggcattcagcctgatggacagatgccaagtgacaag
tcggtgggaggaggagacgacgccttcaacactttcttttcggagacaggagccgggaag
cacgttcctcgtgcggtgtttctcgatttggagccgactgtgatcgatgaggtgcgcacc
ggaacgtaccgtcagctgttccacccggagcagctgatcagcgggaaggaggacgcggcg
aacaacttcgcccgtggtcactacactatcgggaaggagatagtggacctgtgccttgac
cggattaggaagctggcggacaactgcacgggtctgcagggcttccttgtgttcaacgct
gtgggaggaggaacgggatctggtttgggaagtctgctgctggagcgcctgtccgtggac
tacgggaagaagtcgaagctcgggttcacagtgtatccatcgccacaggtgtcgacctcc
gtggtggagccatacaacagtgtgctgtcgacgcactcgctgttggagcacaccgacgtg
gctgtgctgctggataatgaagcgatatacgacatttgtcggaggtctttggacatcgag
cgcccaacttacacgaacttgaaccggctggtgtctcaggtcatctcctccttgaccgcg
tcactccggttcgacggtgcgctgaatgtggatgtgacggagtttcagaccaacttggtg
ccataccccaggattcacttcatgctgtcgtcgtacgcaccagtgatatcggcggagaag
gcgtaccacgagcagctgtcggtggcggagatcacgaactctgcgttcgagccgtcatct
atgatggcgaagtgcgatcctcgtcacggcaagtacatggcgtgctgcctgatgtacagg
ggagacgtggttccgaaggacgtgaatgccgcggtggcgacgattaagacgaagaggacc
atccagtttgttgactggtgtcccactggattcaagtgcggcatcaactaccagccaccg
acggtggtgccgggtggagatctggcgaaggtgcagagggcggtgtgcatgatttcgaac
agcacgagcgttgcagaggtgttctcccggatcgaccataagttcgatctgatgtacgcg
aagcgcgctttcgtgcactggtatgtgggcgaaggtatggaggagggagagttttcggag
gctcgtgaggatcttgcggctctggagaaggattacgaggaagtgggtgcggagtcggct
gaggacggcggcgaagacgacggtgaagagtactga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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