KEGG T01041: PHYPADRAFT

Physcomitrella patens subsp. patens: PHYPADRAFT_129976

Entry

PHYPADRAFT_129976 CDS T01041

Definition

hypothetical protein

Orthology

K00026

malate dehydrogenase [EC:1.1.1.37]

Organism

ppp Physcomitrella patens subsp. patens

Pathway

ppp00020	Citrate cycle (TCA cycle)
ppp00620	Pyruvate metabolism
ppp00630	Glyoxylate and dicarboxylate metabolism
ppp00710	Carbon fixation in photosynthetic organisms
ppp01100	Metabolic pathways
ppp01110	Biosynthesis of secondary metabolites

Module

ppp_M00012	Glyoxylate cycle
ppp_M00168	CAM (Crassulacean acid metabolism), dark
ppp_M00171	C4-dicarboxylic acid cycle, NAD+ -malic enzyme type

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:ppp00020]
Metabolism; Carbohydrate metabolism; Pyruvate metabolism [PATH:ppp00620]
Metabolism; Carbohydrate metabolism; Glyoxylate and dicarboxylate metabolism [PATH:ppp00630]
Metabolism; Energy metabolism; Carbon fixation in photosynthetic organisms [PATH:ppp00710]

SSDB

Motif

Pfam:

Ldh_1_N Ldh_1_C 3Beta_HSD Semialdhyde_dh

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

AA seq 340 aa
MPVQVRADASGAAAPKSGSSTFKVAVLGAAGGIGQPLSLLIKMSPLVSDLRLYDIANVKG
VAADLSHCNTPAQVSAYTGPAELAAALKDVNLVIIPAGVPRKPGMTRDDLFNINAGIVRS
LVEAVAENCPNALINIISNPVNSTVPIAAEVLKAKGVYDPKKVFGVTTLDVVRANTFVAQ
KKNLRLIDVNVPVIGGHAGITILPLLSKTKPTVEFTPAEVEELTVRIQNAGTEVVDAKAG
AGSATLSMAYAAARFAESCMRAMDGDSDVYECAYVQSEVTDLPFFATTLKLGKKGVEEII
SEDLNGLTEYEKKAVEALKTELKGSIEKGVQFANKQAATV

NT seq 1023 nt +upstreamnt +downstreamnt
atgcctgtgcaggtgcgtgccgatgcgtctggggctgctgctcccaagtccggatcctct
acattcaaggttgctgtccttggagccgctggagggattggtcaacctctctccctcttg
atcaagatgtcccctcttgtgtccgaccttcgcctgtacgatattgcaaatgttaaggga
gttgctgcggatcttagtcattgcaacactcctgcgcaggtctctgcctacactggtcca
gcagaactcgcagcagcactgaaggacgtgaacctcgttatcattcccgcaggagtaccc
cgcaaacccggcatgaccagagatgatttgttcaacatcaacgccggcatcgtcaggagt
ctcgttgaagcagttgcggaaaattgccccaacgctctgatcaacatcatcagcaacccc
gtgaactccacggttccaattgctgccgaggttctcaaggccaaaggtgtctacgacccc
aagaaggtcttcggcgtgaccacattggatgtggtgcgggccaacacatttgtggcccag
aagaagaacttgcgcctgattgacgtgaatgttccagtgatcggtggtcacgctggtatc
actatacttcccttgctttcaaagacaaagcccaccgttgagtttacacctgcggaagtg
gaggagctgaccgtgcgtatccagaatgccggtactgaggttgtggacgctaaggccgga
gctggatctgctactctttcaatggcgtatgctgctgccagatttgctgaatcgtgcatg
cgagcaatggatggcgactctgatgtttatgagtgcgcttacgtccaatccgaggtcacg
gacctgcctttcttcgccaccacgctgaagctcggaaagaagggtgtcgaggaaattatc
agtgaggatttgaacgggttgaccgagtacgagaagaaggccgttgaggctttgaagaca
gagttgaagggcagcattgagaagggtgttcagtttgccaacaagcaagctgccactgtc
tag

All links

Pathway (9)   
   KEGG PATHWAY (6)   
   KEGG MODULE (3)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   UniGene (1)   
   JGI-PPP (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (30)   

Download RDF

DBGET integrated database retrieval system