KEGG   Physcomitrella patens subsp. patens: PHYPADRAFT_138277Help
Entry
PHYPADRAFT_138277 CDS       T01041                                 

Gene name
HDA1501
Definition
class II RPD3 type histone deacetylase protein
Orthology
K11407  
histone deacetylase 6/10 [EC:3.5.1.98]
Organism
ppp  Physcomitrella patens subsp. patens
Class
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
AA seq 534 aa AA seqDB search
MDANSPAEGKLDCSSCDDAVKNFVIQEEGEDIENDVHPFTAFLVSHDIEDEDEDEVESED
EEWQPHVRWICINCTMPNPEDEDHCWKCNEQCDSNILEQKLASVPSELTGVECKYLITCY
SKTVIGFDERMLLHEETGKSHPERPNRLRAIMEGLQASGLLSERCFTIPSREATEAELEV
VHTANHISAVQATERRGLSYFTSDTYANEHSALAARLAAGICADLASAIMTGTACNGFAV
VRPPGHHAEQDQVMGFCLHNNVCVAARAAQASGAKKVLVVDWDVHHGNGTQKIFEQDPTI
LYISLHRHEAGAFYPGTGWAHHVGSGPGEGFSVNIPWSCGGIGDEDYLSAFQHIVMPIAR
QFEPDITIVSAGFDAASGDPLGGCDVTPEGYAQMTSLLSFLAAGRILVVLEGGYNLRSIS
ASAAAVMKVLRGSNPGPLPDNLQPTPAGVGAMLDVFTIQRRYWSNLHDATFLKLETLLDT
WSKAGEGKGIKRRYIDNPVWWKWDRKRVRDQRSLILVLSMVTLSCFVSHNLSAS
NT seq 1605 nt NT seq  +upstreamnt  +downstreamnt
atggatgcaaacagccctgcagagggcaagctggattgcagttcatgtgatgatgctgtc
aagaatttcgtgattcaggaagagggggaagacatagagaatgacgtacatccgtttact
gcatttcttgtatcgcatgatattgaagacgaagacgaagacgaagtcgagtcagaagat
gaagagtggcagccccatgtgcgttggatttgcataaactgcacaatgccgaatccagaa
gatgaggaccattgctggaagtgtaacgaacaatgtgattcgaacattttggagcaaaag
ttagcgtctgtgccatccgaattaacaggtgtggaatgtaaatatttaattacctgctat
tcaaaaaccgttattggtttcgacgaaagaatgttattacatgaggaaactggaaaatca
caccctgagcgcccaaatcgactacgagctatcatggaaggccttcaagcttctggattg
ctctccgaaagatgttttacaataccttccagagaagctactgaagcagaattggaagtt
gtccatactgccaatcatataagtgcagtgcaagctacagaaagacgaggcttaagttac
ttcacttctgacacatatgctaacgaacactctgcattagcggcaagactagcagctgga
atttgtgcagatctggcatcagctatcatgactggaacggcctgcaatggttttgcagtg
gttaggccacctggacatcatgctgaacaagaccaagtcatgggattttgcttgcataac
aatgtatgcgtcgctgctcgagctgcgcaggcttccggggcgaagaaggttcttgttgtt
gattgggatgttcaccatgggaatgggacccaaaagatttttgaacaagatccaacaata
ctgtatatctcccttcatcgacatgaagctggtgcgttctatcctggaactggttgggca
catcacgtggggagtggccctggtgaagggtttagtgtcaacataccatggagctgtggc
ggaattggggacgaagattacctgtcagcatttcagcacatagtcatgccaattgctcgt
caatttgagccagatataacaattgtttcagctggctttgatgccgctagcggagatcct
ctgggaggttgtgatgtaactcctgagggctatgcacaaatgacttccctcttgagcttt
cttgcagctggccggatccttgttgtcctggaaggaggttataatctgcgctctatttct
gcctcagcagctgctgttatgaaggttcttcgaggttcaaaccctggtccattgccagac
aatctccagccaactcctgcgggcgtaggagccatgctggatgtgttcacgattcagaga
cgatactggtcaaatctacatgatgcgacattcttaaaattggaaactcttctagacact
tggtccaaagctggtgaagggaaaggcattaaacggcgatacattgacaatccagtttgg
tggaaatgggatcgcaaaagggtaagggatcagagaagcctcattctcgttctaagcatg
gtcaccctctcgtgttttgtcagtcataatctctcagcaagttag

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