KEGG T01041: PHYPADRAFT

Physcomitrella patens subsp. patens: PHYPADRAFT_147990

Entry

PHYPADRAFT_147990 CDS T01041

Definition

hypothetical protein

Orthology

K04646

clathrin heavy chain

Organism

ppp Physcomitrella patens subsp. patens

Pathway

ppp04144

Endocytosis

Class

Cellular Processes; Transport and catabolism; Endocytosis [PATH:ppp04144]

SSDB

Motif

Pfam:

Clathrin Clathrin_H_link Clathrin_propel Clathrin-link

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

AA seq 1697 aa
MAANGPITVKEALALTSIGILPQFVTFTHVTMDSDKYICVRETSPQNNVVIIDMASPMQP
LRRPITADSALMNPSSKVLALKGKLAQIPGTTQDHLQIFNIELKSKVKAHMMLEQVVFWK
WVTSSLLGLVTQTAVYHWSIEGESEPQKMFERTASLMSNQIINYRCDASEKWLVLIGIAP
GSQERPALVKGNMQLFSVDQQRSQALEAHAAVFASIELPGGDHSSTLISFATKTVVAGQI
ISKLHVIELGAQPGKPSFTKKQADLFFPPDFADDFPVAMQITSKYNLIFVITKLGLLFVY
DLETATAVYRNRISPDPIFLTAEATEAGGFYAINRRGQVLLATVNEATIVPFVSIQLNNL
ELAVSLAKRGNLPGADNLIVQRFQELFLEHKHTEAAELAAESPQGILRTPETIARFRTVP
IQAGQTSPLLRYFGTLLNKGKLNAFESLELTRLVVSQKKNHLLETWLTEDKLDCSEELGD
LVKSVDKDLALKIYIKARASPKVVVLFAQRQEFEKILIYSNQVGYTPDYLSLLQTITQTD
PQGAVNFAVKMSEMKGGSPVDYNTITDFFLQRNMIREATAFLLDVLKPNLPEHGALQTKA
LEINLVTFPNVADAILTNGIFKHYDRPRIAQLCEKAGVYMRAMQLYTELSDIKRVIINTH
AIESQALMDFFGTLSKDWALECMKELLSANLRANLQIVVQVAKEYAEQLGINACINMFDE
FKSYEGLFLFLNFYVNSSEDPEVHFKYIESAAKTAQFKEVERITRESNFYPAERTKSFLM
EAKLQDARPLINVCDRHDFVPDLIHYLYVNNMLRFIEGYVQKVNPSKAPQVLSQLLDDDC
PEEFIKGLLLSVRSLLSVEALVDECEKRNRLKLLTPLLEHLVSEGSKDVQVHNALGKVTI
DTNNNPEQFLYTNSYYDSRVVGKYCEKRDSSLAVVAYRRGQCDDELVNVTTRNSLFKLQA
RYVVERMDATLWAKILDPENPFRRQLIDQVVSTALPESKSPEQVSVTVKAFMSANLPNEL
IELLEKIVLQNTAFSSNPNLQNLLILTAVKTEKSRVMDYIHRLENFDGPAVGEIAVGAQL
YEEAFMIFKKFNLNVQAVNVLLDNLHSIGRAAEFAERVEVDEVWSQVGKAQLRDGPISDA
IDSFVRAKDASQFTNVIREAGKLKAYDNLVRYLIMVRQKVKEPQVDSALIFAYAKMSRLD
DLTEIVAQPNGCVANLLVVGDRLFNEELYQAAKVVFSHIGNWPRLTSTLVKLYQFQAAIE
VAHKANSSKTWREVCFACVDTEEFRLAQICGLKIIIQVDLLEEVSEYYQNKGNFDELIML
MESGIGLERAHMGIFTELGILYAKYRPEKLMEHLNLFSTRINIPKLLRICDEHHHWKELS
YLYIQYEEYDNAAATIMGHSPDAWDHIQFKDVVSKVANVELYYKAIQFYLQEHPEILNDL
LAVLVTRVDHSRAVDIMRKAGHLPLVKPYMQAVQNCNLSAVNEALNELYIEEEDYEMIRE
SIDTYDNFDPIAMAQRIENHELLEMRRIAAYIYKKAGRWQQSVALSKKDNLFSDAMETTS
QSGDSVFVEELLTFFVKEGKKECFAACLYTCYDLIQADVVIELAWMNNMMDFAYPFLLQY
LREYSLKVAHLMSYKNQDDVHGKLDHNLVADSNMYAQLLPLALPAPPIVAASGTFDAYAG
LPAYGLLQSRGSTSPTY

NT seq 5094 nt +upstreamnt +downstreamnt
atggcggcgaacggtccgattactgtgaaagaggctctggcgcttacaagcatcggaatc
ctcccacagtttgtcacattcacacatgtgactatggattctgacaagtacatctgcgtg
cgcgagacatcgccacaaaacaatgtagtgattatcgacatggcttcgcccatgcagccg
ttacgaagacccataacagcagactcggctcttatgaatccatccagcaaagttctcgcc
ctcaaaggcaagttagctcaaattcctggaacaacacaagaccatttgcagatcttcaat
atcgagttgaagtcgaaagttaaggctcacatgatgctggagcaggttgttttctggaaa
tgggttacatcaagtttgctagggcttgtcacacagacagcggtgtatcactggtcaata
gaaggtgagtctgagcctcagaaaatgttcgagaggacggcgagtctcatgtccaaccag
ataattaactaccgatgcgacgcatctgagaagtggctcgtgctcattggcattgcacct
ggatcacaggagcgtccggcactggttaagggcaacatgcagctgttctccgtggaccag
cagcggagtcaggccctggaagctcatgcagcagtcttcgcgtcgattgagcttccaggt
ggtgatcattcctccactctcatctcattcgcgactaaaacggttgtggcggggcaaatc
atctccaagctgcatgttattgaactaggagcccaaccaggcaaacctagttttaccaaa
aagcaagcagatcttttcttcccgccggacttcgcagatgatttcccagtggctatgcaa
ataacctccaaatacaacctgatttttgttattaccaagctcgggttactttttgtttac
gacctagagactgcaacagccgtttacagaaaccgaattagccccgatccaatctttttg
acggcagaagctactgaagcaggtgggttttatgcaattaatcgccgtggacaagttttg
cttgccactgtgaatgaagcaacgattgttccgttcgttagcatacagttgaataatctg
gagcttgccgtcagtcttgcgaagcgaggaaatctaccaggggcagataatttgattgta
cagcgatttcaggagttgttcctcgagcataaacacacagaagcagcagagctcgcagca
gagtcgccccaaggcattctccgcactccagaaaccatagccaggtttcggactgtaccc
atacaagcagggcagacctctccattgttgcgatactttggaaccttgttgaacaaagga
aaattaaatgctttcgaatccttggagcttacccgtttggttgtaagccaaaagaagaac
catttgttggaaacatggttaacagaggataaactagattgcagtgaggagctgggagat
cttgtaaagagcgtagataaggatttggcactaaagatctacattaaagctagggcttct
ccaaaagtagtggtactgtttgcccaacgtcaagaatttgaaaagatccttatttattcc
aatcaggttggctacactccagactacttatctttgctgcaaactatcacacaaacagat
cctcagggggcggtgaattttgcagtaaagatgtcagaaatgaaaggtggcagtccagtg
gactataataccattacagattttttcctccagcgtaacatgattagggaggccactgca
ttcctacttgatgttctcaagcccaacttgccggaacatggtgctcttcaaacaaaggct
ctcgaaatcaatcttgtcacttttccaaacgtcgcagatgcgattttgactaatggcatc
ttcaaacattatgaccgtcctcgaattgctcagctttgtgagaaggctggcgtgtatatg
cgtgctatgcagctctatacggagctgagcgacatcaagcgtgtgatcatcaacacccat
gccatcgaatctcaggcattgatggatttctttgggacgctctccaaagattgggcatta
gaatgtatgaaggaacttctttcggctaacttgcgagccaacttgcaaattgtggtccag
gtggccaaggagtatgctgagcaactaggcattaatgcttgtattaacatgtttgatgaa
ttcaagtcctatgagggtttatttctcttcctcaatttctatgtgaactccagtgaggat
ccagaggttcatttcaaatacattgaatctgcagcaaagactgctcagtttaaggaagtt
gaacgcatcacaagggagtccaatttctatccagctgagcgaacaaaatcttttctaatg
gaagctaaactacaggatgctcgccctcttataaatgtctgtgatcgccatgattttgtg
cccgatttaatacattatctgtatgtgaacaatatgctgcggtttatagaaggatatgtt
caaaaggttaatccaagcaaagcaccacaagtcttaagtcaattattggatgatgactgc
ccggaagaatttatcaaaggattgctgctctccgttcggtcactattgtcggtggaggca
cttgtggacgaatgtgagaaaaggaatcgactcaaactgctgacgccgttactggagcac
cttgtaagcgagggaagcaaagacgttcaagttcacaatgccttggggaaggttactatc
gacacaaataacaacccagagcagttcctatatacaaattcatactatgattctcgagtt
gttggcaagtattgtgagaaacgggattcgtcactagcggtagtggcatatcggcggggt
caatgtgatgatgaactagttaacgtgacaacaagaaactcccttttcaagcttcaggct
agatatgtggtggagcgtatggatgcgactttgtgggctaagatattagaccctgagaac
ccattcaggcgtcagttgattgaccaggtggtatctacagcactaccagagagcaagagc
cctgagcaggtctcagttactgtgaaagccttcatgtctgccaacttgccaaacgaactt
attgaactgttggagaagattgtccttcaaaacacagcctttagtagcaaccccaattta
caaaacctcttgattttaactgccgtgaaaactgaaaaatcacgagtgatggattacatc
caccgtttggagaactttgatggtccagctgttggagagattgctgttggagcccagctg
tacgaggaagcgtttatgatcttcaagaaatttaacttgaatgtgcaagctgtcaatgtc
cttctagacaatcttcacagcatagggcgagctgccgagtttgccgaacgtgtggaagta
gacgaggtgtggagccaagttggcaaagcacaactcagagacggtcccataagtgatgca
attgattcctttgttcgcgccaaagatgcttcccagttcactaatgtcataagagaagct
ggaaagctcaaagcttatgataatctagtgcgttatttgattatggtgcgccagaaggtt
aaggagccacaggtagattcggcgctaatctttgcctatgctaaaatgagtcgccttgac
gatcttacagaaattgtcgcacaacccaatggctgtgtagcaaatctactcgtggttggg
gaccgtctctttaatgaagagctttatcaagctgccaaggttgtcttctctcacattggg
aattggcctcgtcttaccagcactctggtgaagttatatcagttccaagctgcaatcgaa
gttgctcataaagcaaatagctctaaaacatggagggaagtttgttttgcttgcgtggat
accgaggaatttcggttggctcaaatttgtggccttaagatcattattcaggtggatctt
ttggaagaggttagcgaatactaccagaataagggcaacttcgatgagctcataatgttg
atggaaagtggaattggtctggaacgggctcacatggggatatttacggagcttggaatt
ttatatgcgaaataccgtccagagaagctcatggaacatctaaatctcttctctacccgc
attaatattcccaagcttcttcgtatctgtgacgagcatcaccactggaaggagctttcc
tacttatacatccaatatgaagagtatgacaatgcagcagcaaccatcatgggtcattct
cccgacgcctgggatcatattcagtttaaggatgtggttagcaaggtggctaacgtagaa
ttgtactacaaagctatccagttctatctgcaagagcatccagaaattctcaacgacctt
ctcgctgttttggtaacccgtgttgatcacagccgtgcagtggatatcatgaggaaggca
ggacatttgcctctggtgaagccgtatatgcaagctgttcaaaattgcaacttgagtgct
gtgaatgaagctctcaatgagctctacatcgaagaagaggactatgaaatgattagagag
tccatcgacacttatgataattttgatccaattgccatggcacagcgtatcgagaatcat
gaacttctggaaatgcgaagaattgctgcttacatatataagaaggctgggaggtggcag
caatcagtagctctttccaaaaaggataaccttttttcggatgccatggagaccacgtca
cagtctggcgacagtgtatttgtagaagagttgctaactttctttgtcaaagagggcaag
aaagagtgttttgccgcatgcctgtacacctgttatgatctcattcaagctgatgtggtg
atagagttggcttggatgaacaatatgatggatttcgcctaccctttcctgctccagtac
ctccgagagtactctttgaaggttgctcatctcatgagctacaagaaccaggatgatgtg
catgggaaactcgaccacaatttggtagcagattcgaatatgtatgcgcagcttttacct
ttggctttgccggccccaccaattgttgcggctagtgggacatttgacgcttatgcaggg
ttgccggcttacggtttgttgcagtctagaggtagcacatcaccaacctactga

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-PPP (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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