KEGG T01041: PHYPADRAFT

Physcomitrella patens subsp. patens: PHYPADRAFT_158810

Entry

PHYPADRAFT_158810 CDS T01041

Definition

hypothetical protein

Orthology

K04646

clathrin heavy chain

Organism

ppp Physcomitrella patens subsp. patens

Pathway

ppp04144

Endocytosis

Class

Cellular Processes; Transport and catabolism; Endocytosis [PATH:ppp04144]

SSDB

Motif

Pfam:

Clathrin Clathrin_H_link Clathrin_propel Clathrin-link Coatomer_WDAD

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

AA seq 1712 aa
MAAASAPITMKEALTLTSLGINQQFVTFTHVTMESDKYICVRETSPQNSVVIIDMSMPNQ
PLRRPITADSALMNPSSRVLALKALIPGSTQDHLQIFNIELKAKMKSYQMPEQVVFWKWI
TPRLLGLVTQTSVYHWTIEGESEPVKMFERTANLSGNQIINYRCDPSEKWLVLIGIAPGA
PERPQLVKGNMQLFSVDQQRSQALEAHAASFASHQVAGNDSPSLLIAFTTKTISAGQLTS
KLHIIELGATSGRPGFSKKAADLFFPPDFADDFPVSMQISAKYGLIYVITKLGLLFVYDL
ETATAVYRNRISPDPIFLTADAPTVGGFYAVNRRGQVLLATVNEATIIPFVSNQLSNLEL
AVNLARRGNLPGAEGLVVQRFQELFSQMKYKEAADLAAESPQGILRTPDTVAKFQSVPVQ
PGQTSPLLQYFGTLLTKGKLNVFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDMALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRADPQ
GAVNFALMMSQLEGGCPVDYNTITDLFLQRNMIREATAFLLDVLKPNLPEHALLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRVAQLCEKAGLYMRALQHYTELNDIKRVVINTHAI
EPQGLVEFFGTLSKEWALDCMKELLQVNMRGNLQIIVQVAKEYGEQLGVDACVKLFESFK
SFEGLYFFLGAYLSTSEEPEIHYKYIEAAAKTGQIKEVERVTRESNFYPAERTKNFLMES
KLPDARPLINVCDRHGFVPDLTHYLYVNNMLRYIEGYVQKVNPQNAPLVVGQLLDDDCPE
DFIKGLILSVRSLLPVEPLVDECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDT
NNNPEHFLTTNPYYDSKVVGKYCEKRDPTLAVVAYKRGLCDDELVNVTNKNSLFKLQARY
VVERMEPDLWLKVLNPENSCRRQLIDQVVSTALPESKNPEQVSATVKAFMTADLPHELIE
LLEKIVLQNSAFSGNPNLQNLLILTAIKADTTRVMDYINRLDNFDGPAVGEIAVGAELFE
EAFAIFKKFNLNVQAVNVLLDNIRNIDRAVEFAARVEEDDVWSQVGKAQLREGLVSDAIE
SFIKANDASQYNEVIDVASGVRAYDDLVKYLNMVRKKVKEAKVDSELIFAYAKLNRLDDI
EEFIVTPNLANLQTVGDRLFDEELYEAAKIIFTHISNWARLASTLVKLHQFQAAVDAARK
ANSARTWKEVCFACVDAEEFRLAQICGLNVIVQVDDLEEVSEYYQNRGRFDELISLMESG
LGLERAHMGIFTELGTLYARYRPDKLMEHLKLFVTRINIPKLIRVCDEQQHWKELTYLYI
QYDEYDNAAATMMSHSPEAWEHMQFKDVAVKVANVELYYKAVYFYLEEYPELINDLLNVL
AARVDHTRVVDIMRKAGHLPLVKPYMVAVQSANNAAVNEALNNLYIEEEDYERLRESIDM
YDNFDQISMAQRIEKHELLEMRRVGAYIYKRAGRWKQSVALSKKDNLYKDAMETCSQSGD
RELAEELLTFFVDKGKKECFAACLYTCYDLIRADVAVELAWMHGMMDFAVPYLLQFLREY
SSKVDDLIKDKLEATEEKKSKEQQEKDVVAESNMYAQLLPLALPAPPVAGMPGLGGGMPV
PGMGGGMPMPGMPGMPGMPGMSGYGMPSMSAF

NT seq 5139 nt +upstreamnt +downstreamnt
atggcggccgctagcgcgcccatcaccatgaaggaggctctcacgctgacgagcctcggg
attaaccagcaattcgtcacatttacacatgtgacgatggagtccgataaatacatttgc
gtgcgggagacgtcgccgcaaaacagtgtggtgatcattgacatgtcgatgcctaaccaa
cctctccgtcgccctatcaccgccgactccgccttgatgaatccttctagcagagtgctg
gccttgaaagccctgatacctggttcaacacaagatcatctccaaattttcaacatcgaa
ttgaaagccaagatgaaatcgtatcaaatgccagaacaggtagttttttggaagtggatt
acaccgaggttgctaggactcgtgacacaaacttcagtttatcactggactattgaaggt
gaatctgaacctgtaaagatgtttgagaggacagcaaatttgagtggcaaccagatcatc
aattatagatgcgacccgtcagagaagtggcttgtgctgattggtatagctcctggagca
cctgagcggccccaacttgtgaaaggaaacatgcagttgttttcagtggaccagcagagg
agtcaggcgcttgaagctcatgctgcgtcatttgcttcccaccaggtggctggaaacgat
tctccatctctactgattgctttcacaacaaaaactatctcagctgggcagctaacatcc
aagctgcatattattgagctgggtgctacgtcaggtagacctggtttctccaagaaggca
gcagatctattttttcctccagattttgccgatgactttcccgtttcgatgcagatctct
gccaagtacggccttatttatgtaattacgaagctcggtcttctttttgtatacgacctg
gaaacggcaacagctgtttatagaaaccgaattagtccagaccctatttttttgactgcc
gatgctcccacagttggtgggttttatgctgtaaatcgccgaggccaagtcctccttgct
acagtgaatgaggcaacaatcattccttttgtcagtaaccagctaagcaacttggagctt
gcagtgaatcttgcgagacgaggaaatctgcctggagcggagggactggttgtacaacgt
tttcaagaattgttctcccagatgaagtacaaggaggcagcagatcttgctgcagagtcg
cctcagggcattcttcgaactcctgatacagttgccaagtttcagagtgttccagtgcag
cctggacaaacttcaccactcttgcagtactttgggactttattgacaaaggggaagttg
aacgtgttcgaatctctggagctttcgcgactagtggttaaccagaacaagaagaatctg
ctggaaaactggttggcagaggacaagctggaatgcagtgaagagctgggtgatcttgtc
aagactgtggacaatgatatggcactcaagatatacattaaggctagggctacaccaaag
gtagttgcggcctttgcagagcgtcgtgaatttgacaagattttgatctactccaagcag
gttgggtacactccagattacctatttctgctgcagacaatcctacgagctgaccctcaa
ggtgctgtgaactttgctctgatgatgtctcaacttgaaggtggctgcccagttgactac
aacaccatcactgacttatttcttcagcgcaacatgattagggaggctactgctttcctc
ctggacgttttgaagccaaatcttccagagcatgccttacttcagactaaggttctagaa
attaatctggtcacattccctaacgtggctgacgcaattttggcgaatggtatgttcagt
cattatgaccgtcctcgtgttgcccaattgtgtgagaaagctggtctctacatgcgcgcc
cttcagcattacacggagctaaatgatatcaagcgcgttgttattaacacccatgccatt
gagccacagggtcttgttgagttttttggcacgctttccaaagaatgggccttggactgc
atgaaagagttgctccaggtgaatatgcgtggaaatctgcaaattatagtccaggtggcc
aaggaatacggtgagcagctgggtgtcgacgcgtgtgtgaagttgtttgagagtttcaag
tcatttgagggcttatactttttcctcggagcgtacttgagtacgagcgaggagcctgaa
attcactacaagtacattgaggctgcggcaaagactggccaaattaaagaagtagagcgt
gttacgagggagtccaatttctaccctgcagagagaaccaagaatttcctgatggagtcc
aagctcccagatgcaaggcctcttatcaatgtttgcgaccgtcatggttttgtgccagat
cttactcattacctgtatgtcaataacatgcttcgttatattgaaggttacgtacagaag
gttaaccctcaaaatgcacctttagtggtcgggcaattgttggatgatgactgtcccgag
gacttcattaaaggtttgattctttctgtccgctctctacttccggtggaaccattggtt
gacgagtgcgaaaagaggaaccgtctgaggttgctgacacagtttctggagcaccttgtg
agcgaagggagtcaagatgtgcatgttcataatgctttggggaaaatcattattgacaca
aacaataatcctgagcacttcctcaccacaaatccctattatgattccaaagttgttggc
aagtactgcgagaagcgcgatccaacgcttgctgtggttgcatacaaacgtggcctgtgt
gacgatgaacttgtcaatgtcaccaacaagaattctctctttaagcttcaggccagatat
gtggtggagcgcatggagcccgacctgtggttgaaggtcttaaatcctgagaattcttgt
aggaggcagctcattgatcaggtggtatctactgctcttccagagagcaagaatccagag
caggtgtcggccactgtcaaagctttcatgactgcagatttgccacatgagctgattgag
cttctggagaagatcgttcttcagaattcagctttcagtggcaaccccaaccttcagaat
ctgctcattcttactgctatcaaggccgatacgactcgggtcatggactacattaaccgt
ttggataacttcgatggtcctgccgtgggtgagattgcagtgggtgcggaactttttgag
gaagcgtttgcaattttcaaaaagttcaacctcaacgtccaagcagtgaatgttctcttg
gacaacattcgcaacatagatcgtgctgtcgagtttgctgctcgtgttgaagaggacgat
gtttggagccaggttggtaaggcgcagttgagggaaggattggttagcgatgccattgag
tctttcatcaaggcaaacgatgcctctcagtacaatgaagttatcgatgttgcatctggt
gtaagagcatatgacgacttagtgaagtacttgaacatggtacgcaagaaagtaaaggag
gcgaaggtagactccgagttaatttttgcttacgctaagctcaatcgtctcgacgacatt
gaggagttcattgttactcctaatcttgcaaatcttcaaactgttggagaccgcttgttt
gatgaagaactgtatgaggccgccaaaatcatttttacccacatttccaactgggcaagg
cttgccagtacccttgtcaaactgcaccagttccaagcagccgtggatgcagccaggaag
gccaacagtgcacggacgtggaaggaagtctgctttgcttgtgtggatgccgaagagttt
cgtctggctcaaatttgtggtctcaatgttattgtccaggttgatgatctggaagaggtc
agcgaatattaccagaacaggggtcgctttgacgagctcatttcacttatggaaagtggg
cttggtttggagcgtgcccacatgggcatcttcacagagttgggcactttgtatgccaga
taccgtccagataagctcatggagcatctcaagctattcgtcactcgtatcaatattccg
aaacttattcgtgtgtgcgatgagcagcagcactggaaggagcttacttacttgtacatt
caatatgatgagtacgataatgctgctgcaaccatgatgagtcattctccagaagcttgg
gaacacatgcagttcaaggatgttgccgttaaggttgcaaatgtagaactttactataag
gctgtgtacttttacctcgaggaatatcccgagctcatcaacgacttactcaatgtgttg
gctgcacgtgttgaccacacacgggttgtggatatcatgcgaaaggccgggcatcttcct
ttggtgaagccatacatggtagcagtacagagtgccaataacgctgcagtcaatgaggct
ctgaacaacttgtacattgaggaggaagattatgagcgattgagagagtccatcgatatg
tatgataacttcgatcagatttcaatggctcagaggattgagaagcacgagctcctggaa
atgcgccgtgttggagcgtacatctacaagagagctggtagatggaaacaatctgttgcc
ctgtccaagaaggacaatttatacaaggatgccatggagacttgctcacagtcaggggat
cgtgaacttgctgaggagcttctcacgttcttcgtggacaagggcaagaaggaatgcttt
gctgcttgtttgtacacttgttacgacctcattcgtgccgatgttgcggttgagttggca
tggatgcatggcatgatggacttcgctgtaccatacctgttgcagttcttgcgtgaatat
tcttcgaaggtggatgatttgattaaagacaaattggaagccactgaggagaagaagtct
aaagagcagcaggaaaaggacgtagttgctgagtcgaacatgtacgctcagctcttgcct
ctggctctaccagctccccctgttgccggtatgcctggtttgggtggaggtatgcctgtg
ccgggtatgggtggaggtatgccaatgccaggaatgccgggcatgccaggtatgccgggt
atgtcaggctacggcatgccctcaatgagcgctttttaa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   UniGene (1)   
   JGI-PPP (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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