KEGG   Physcomitrella patens subsp. patens: PHYPADRAFT_198646Help
Entry
PHYPADRAFT_198646 CDS       T01041                                 

Definition
hypothetical protein
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
ppp  Physcomitrella patens subsp. patens
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:ppp00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    PHYPADRAFT_198646
Enzymes [BR:ppp01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     PHYPADRAFT_198646
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     PHYPADRAFT_198646
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
AA seq 496 aa AA seqDB search
MPELPEVQAAKVLVGSRCLGGVIVKALVANDSKVIDGVTPAALQKALLGKKILETHRKGK
HLWLQLDSPPYPSFQFGMSGAVVVKGVKGLQYKSSKVDDTEEFPSKYWKVHLKLDTGVEV
AFTDKRRFARVRLLDDPAKEPPISELGLDAYLELPSAKDFTEALKTKKGAIKALLLDQSF
LAGIGNWVGDEVLYQSKIHPEQSANSLKDEECTRLHTAIRVVLDKAVSVHADSEKFPRSW
IFHHRWDRKPGKIRGNQIETVTVGGRTSAYVPNIQKYSGRELKGARRKAAIAHDIPHDET
DTDENVDPAVGEVAADKEMKTQPKHSRGRPPKHKQKPTSSEGKVDTEEIGTESLSEPKRR
GRPPKVKTDTQTKVLTKEGEKTSEDDDSGVEDAGEAPNKLAGAGTPKRRDRPPKSKPEAA
EEVEIIKKIKLGLSDEGSASPKRGRGRPPKTKSDPEAKLADTKNGHVEVLTQVAENAVPT
LTPKKRGRPSKTKAPS
NT seq 1491 nt NT seq  +upstreamnt  +downstreamnt
atgccggagcttccagaggttcaagcagccaaagtgctggtgggtagccgttgcttgggt
ggagtgatagtgaaggccctcgtggctaacgactcgaaggtcatcgatggggtgacgccg
gctgctctccagaaagctctcttggggaaaaaaattctagagacccatcggaagggcaag
cacttgtggctccagcttgattctcctccgtatccctcctttcagttcggcatgagcggt
gctgtcgtcgtcaagggcgtcaagggcctgcaatataaaagctccaaagtcgatgacaca
gaagagtttccatcgaaatactggaaagtccacttgaagctggacactggagtggaggtg
gcatttactgacaaacgtcgctttgctcgtgttcgcctactcgacgatcctgcaaaagag
ccgccaatttctgagttggggttggatgcatatcttgagcttccaagtgcgaaggacttc
actgaagctctcaaaaccaaaaaaggagccattaaagcccttcttctcgatcagagcttt
cttgcaggcattggaaattgggtgggagatgaagtgctttatcagtcaaaaattcatcca
gagcagtcggccaattcattgaaggacgaggagtgcaccaggttacacaccgccatcaga
gtggttttggataaggcagtttctgttcatgcagacagtgagaaatttcctcggagttgg
atatttcatcatcgttgggacaggaagccagggaagattagaggaaaccagattgagaca
gtaaccgtcggcgggaggacgtctgcttatgtccccaatatacagaagtatagtggacgt
gaattgaaaggagccaggaggaaggcagctattgcacatgatatccctcacgacgaaacc
gatacggatgagaatgtagaccctgcagttggtgaggtagcggccgacaaggaaatgaaa
acacagcctaagcacagtaggggacgacctccaaaacacaaacaaaaacctacctcgagc
gaaggaaaagtagacactgaggaaattggcacggaaagtctttctgaacccaaacgaaga
ggtcgacctcccaaggtaaaaactgatactcaaactaaggtcctaactaaggaaggagaa
aaaacttcagaagacgacgatagtggagtggaggacgcaggtgaggcacctaataaactg
gccggagcgggaacgcccaagcgtagggataggcctccaaaatcaaaacccgaagcagct
gaagaggtggagattatcaagaagatcaagttggggttaagtgacgaggggtctgctagt
ccaaaacgaggcagaggtcgacctccgaagacaaaatccgatcccgaagccaaactcgcg
gacactaagaatggtcacgttgaagttttaactcaggttgcagaaaatgctgtacccact
ctaacccccaagaaaagaggccgcccgtcaaagaccaaagctcccagctga

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