KEGG   Photobacterium profundum: PBPRA0206Help
Entry
PBPRA0206         CDS       T00173                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
ppr  Photobacterium profundum
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:ppr00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    PBPRA0206
Enzymes [BR:ppr01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     PBPRA0206
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     PBPRA0206
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
1:213233..214042
Genome map
AA seq 269 aa AA seqDB search
MPELPEVEVSRMGITPHMVGQTVTKIIVRNPKLRWPIPEEIQQIEGQVIRKVTRRAKYLL
LHTDVGYAIVHLGMSGSLRILPASIPPEKHDHVDLVLSSGEVLRYNDPRRFGAWLWGLPD
LDHKVLSQLGPEPLSNDFTAEYLQERAKGKRTAIKQFIMDNKVVVGVGNIYANESLFSAG
IHPKRAAGEISPEKIALFVDEIKSVLAFAIEQGGTTLKDFKNADGKPGYFAQELQVYGKG
GKPCPRCDNPLSEMKIGQRASVFCSECQK
NT seq 810 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaattaccggaagttgaagtaagccgaatggggatcaccccgcatatggttggt
caaaccgtgacgaaaattattgtgcgaaaccctaaattacgttggccgatccctgaggaa
attcaacaaatcgaagggcaggtgattcgaaaggtgactcgtcgagctaaatatctactg
ctacataccgatgtggggtatgccatcgtgcaccttggtatgtcggggagtttgcgaatt
ttacctgcttccattccgccagaaaagcatgaccatgttgatttagtgctatcgagtggt
gaggtgctgcgttataacgaccctcgtcgctttggggcgtggttatggggattgcctgac
ctagaccataaagtattgagtcaactcggccctgagccgcttagcaatgattttaccgct
gaatacttacaagagagggcgaagggtaagcgcacggcaataaagcagttcatcatggac
aataaagtagtggtgggagtcgggaatatttacgcgaatgagtcgttatttagtgcgggt
atccatccgaaacgcgctgcaggtgaaatatcacctgaaaaaatcgcgttgtttgttgat
gaaattaaatcggtactcgcgtttgcgattgaacaaggcggaacgacgttgaaagacttc
aaaaatgcagacggtaaacctggttactttgctcaagagctgcaagtctacggtaaaggc
ggaaagccctgcccacgctgtgataatccgttgagtgaaatgaaaattggtcagcgagcc
agtgtgttttgcagtgagtgccagaagtag

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