KEGG T00173: PBPRA3220

Photobacterium profundum: PBPRA3220

Entry

PBPRA3220 CDS T00173

Definition

UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase

Orthology

K01928

UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]

Organism

ppr Photobacterium profundum

Pathway

ppr00300	Lysine biosynthesis
ppr00550	Peptidoglycan biosynthesis

Class

Metabolism; Amino acid metabolism; Lysine biosynthesis [PATH:ppr00300]
Metabolism; Glycan biosynthesis and metabolism; Peptidoglycan biosynthesis [PATH:ppr00550]

SSDB

Motif

Pfam:

Mur_ligase_M Mur_ligase_C Mur_ligase

Other DBs

NCBI-GI:

54310308

NCBI-GeneID:

3122077

UniProt:

Q6LMF1

Position

1:complement(3658724..3660244)

AA seq 506 aa
MLSPSQSITLGSLLSPWMATSDWQEKWREHSVVNMTIDSRQIEADDLFVAVNGHAVDGRG
FIPAAINAGATAVLAEADNIAKHGDIVEQDGIVIIYFQQLNQYLSAIANRFYAQPDTRLK
LLAVTGTNGKTTISQLLAQWANLIGYNAGVMGTTGNGLLNSLTPAVNTTGNAIEIPHVLH
DLVDQGADFAAMEISSHGLVQGRVKALQFVASIFTNLSRDHLDYHGDMANYADAKKCLFT
EHQAGIPVINADDDIGFTWLADLPHAVAVVTDKARLGEHYQGQALWLTDVMYSTQGVNIS
FDSSWGAGQFTAPLVGSFNVSNLLLALATLLALGHSIDKLIATAPHLTAVIGRMEVFQSP
DKPMVVVDYAHTPDALEKALQALRVHCQGKLWCIFGCGGDRDTGKRPMMAEISERLADRI
IITDDNPRTEAPAAIVSDMLQGLALPQQAQVIHDRKLACTYAIEHAQVNDIILLAGKGHE
DYQVLADRTIHYSDRETVQALFGEIA

NT seq 1521 nt +upstreamnt +downstreamnt
atgttaagtcctagtcaatcgatcacacttggttcattgctttcaccgtggatggcaaca
tctgattggcaagaaaagtggcgtgaacacagtgtggtgaatatgacgattgatagtcgt
caaattgaagccgatgacttattcgttgcggttaatggtcatgccgttgatggtcgtggc
tttattccggcggcaattaacgctggggcaaccgctgttctcgctgaagccgacaatatc
gctaaacatggcgatattgttgagcaagacggtatcgtgattatttattttcagcaattg
aatcagtacctttcagcaattgccaaccgcttttatgcccaacccgatacacgtcttaaa
ttattggctgtgacaggtacgaatgggaaaaccaccattagccaactgttagcacaatgg
gcgaatctcattggttataacgcaggagttatgggcacgactggcaatggtttgttaaat
agccttactcctgcggtgaataccacgggtaatgcgattgaaatccctcatgtattgcat
gatcttgtcgatcaaggtgctgattttgccgcaatggaaatttcatcacacgggctagtg
caaggacgcgttaaagccttgcagttcgttgccagtatctttaccaatttaagccgcgat
caccttgattatcatggtgatatggcaaattacgctgatgccaaaaaatgtttgtttacc
gaacatcaagcgggcataccggttattaacgccgatgatgatataggctttacttggtta
gccgatttgccccatgccgtcgcggttgtaacggataaagcccgtttaggcgagcattat
cagggacaagcgttatggttaacggatgtcatgtacagcactcaaggcgttaatataagc
tttgattctagctggggggctggtcagtttacagcaccgcttgttggctcatttaatgtg
tcgaatctattgctggcactcgcgacattattagcgttagggcactctattgataaattg
attgcaacagcaccacacttgactgcagtgattggtcggatggaagtttttcaaagtcct
gacaaacctatggtagtggttgattatgctcatacgccagatgctttagaaaaggcactg
caagcgttacgtgtgcattgtcagggcaagttgtggtgtatctttggctgcggtggcgac
cgagatacgggtaagcgtcctatgatggctgaaatatcagaacgcttagctgatcggata
attataacggatgacaatccgcgcacagaagcgccagccgctatcgtcagtgatatgttg
caagggttagcattaccacagcaagcacaagtgatccacgatcgtaaattagcctgcact
tatgcaatcgagcatgcacaggtgaatgacattattttattagcaggaaaaggtcatgag
gattaccaagttctcgccgatcgaaccattcattattccgaccgtgaaacggtgcaagct
ttatttggggaaatagcatga

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

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