KEGG P.profundum: PBPRB1745

Photobacterium profundum: PBPRB1745

Entry

PBPRB1745 CDS P.profundum

Definition choline dehydrogenase (EC:1.1.99.1)

Orthology K00108 choline dehydrogenase [EC:1.1.99.1]

Pathway ppr00260 Glycine, serine and threonine metabolism

Class Metabolism; Amino Acid Metabolism; Glycine, serine and threonine
metabolism [PATH:ppr00260]

SSDB

Motif Pfam: GMC_oxred_N GMC_oxred_C FAD_binding_2 DAO Lycopene_cycl
Pyr_redox_2
PROSITE: GMC_OXRED_1 GMC_OXRED_2 PROKAR_LIPOPROTEIN

Other DBs NCBI-GI: 54303412
NCBI-GeneID: 3121754
UniProt: Q6LGH5

Position 2:complement(1898022..1899728)

AA seq 568 aa
MNTTYDYIIVGAGSAGCVLADRLSASGEHYILLLEAGGSDRSIFIQMPTALSYPMNSEKY
AWQFETQPEAGLDSRSLHCPRGRVLGGSSSINGMVYVRGHACDYDEWVEQGAEGWSYQEC
LPYFRRAESWIHGEDTYRGGDGPVGTCNGNDMELNPLYQAFIDAGQQAGYPKTDDYNGYQ
QEGFGPMHMTVDKGIRASTSNAYLRRAMKRSNLTVRKGVVTRKVLIKNKQAIGVEIEVGG
KVQSVYANTEVLLSAGSVGSPQLLQLSGIGPKAVLEQAGIAVKHDLPGVGENLQDHLEVY
FQYACHQPITLNSKLGLISKGLIGTRWILQKDGLGATNHFESCAFIRSRAGLKWPNIQYH
FLPAAMRYDGQAAFDGHGFQVHVGPNKPQSRGRIWITSADPHQKPNIEFNYISTEQDKQD
WRDCIRLTREILAQPAMDDYRGEEIQPGADITSDEAMDAWVRQNVESAYHPSCTCKMGSD
NDPMTVLNKDCQVRGIDSLRVIDSSVFPTIPNGNLNAPTIMVAEKAADAILGNTPLSPSN
APTWIAPQWETEQRNGAAQRPMFHQQRK

NT seq 1707 nt +upstreamnt +downstreamnt
atgaacacaacgtatgattacatcattgtcggcgcgggatctgcgggctgtgtgttggcc
gaccgtttaagtgcttcgggtgaacattacatcttactgcttgaagcggggggaagtgac
agaagtatctttattcaaatgccaaccgcattgtcatacccaatgaacagtgaaaaatat
gcatggcaattcgaaacacaacctgaggcaggtcttgatagccgcagcctgcattgtccg
cgaggacgtgttctgggtggcagttcttcgatcaacggtatggtgtatgtgcgtggccat
gcttgcgattatgatgagtgggtagagcagggtgctgaaggctggagttaccaagaatgt
ctgccgtattttcgtcgtgctgaatcatggattcatggagaagacacctaccgcggaggt
gatggtcctgttggtacatgcaatggtaacgatatggaactaaatccactatatcaagcg
tttatcgatgctggccaacaagcaggctacccgaaaactgatgactataatggctatcag
caagaaggttttggccctatgcatatgaccgttgataaaggtatacgtgcctctacttca
aatgcttaccttcgccgcgctatgaaacgcagcaacctgacagtgagaaagggtgttgta
actcgtaaggtattgatcaaaaacaaacaggcgataggtgttgagatagaagtcggcggt
aaagtgcagtctgtttatgcgaacaccgaagtgttgttatcggcgggctcagtcggttct
ccgcaacttcttcaattatcgggcattggtcctaaagcagtattagaacaagctggtatt
gctgttaaacatgatttaccgggtgttggtgaaaatctgcaagatcaccttgaagtgtat
ttccaatatgcctgtcaccagcctattaccctgaacagtaaattggggcttattagcaaa
gggttgattggtacgcgttggatattgcaaaaagatggcttgggtgcaaccaaccatttt
gaatcatgcgcctttatccgctctcgtgcaggtctaaaatggccaaatattcagtatcac
ttcttgcctgcagccatgcgatatgacggccaagccgcctttgatggtcatggtttccaa
gtacatgttggtccgaacaaaccgcaaagccgtggccgtatttggataacatcagccgat
ccgcaccaaaagccgaacattgaatttaactatatcagcactgaacaagataaacaggac
tggcgcgattgcatccgtctaacgcgtgaaattctggctcagccagccatggatgattat
cgcggtgaagaaattcaaccaggtgcagatattaccagtgatgaagcgatggatgcttgg
gttcgccaaaatgtggaaagtgcctaccacccgtcttgtacttgtaaaatgggatcagat
aatgatccaatgacagtgctgaataaagattgtcaggtcagaggcatcgactctttacga
gtgatcgattcttcagtattcccaaccatccctaatggcaaccttaatgctccaaccatt
atggtggccgaaaaagcagccgatgccatcttagggaatacaccactctcaccatcaaac
gcgccgacgtggatcgcgccgcaatgggaaacagaacaacgtaacggtgccgctcaacgc
cctatgtttcaccaacaaagaaaataa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (9)   
   Pfam (6)   
   PROSITE (3)   
All databases (20)

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