KEGG   Pseudomonas protegens Cab57: PPC_4424
Entry
PPC_4424          CDS       T03613                                 
Name
(GenBank) DNA gyrase subunit A
  KO
K02469  DNA gyrase subunit A [EC:5.6.2.2]
Organism
ppro  Pseudomonas protegens Cab57
Brite
KEGG Orthology (KO) [BR:ppro00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppro03032]
    PPC_4424
   03400 DNA repair and recombination proteins [BR:ppro03400]
    PPC_4424
Enzymes [BR:ppro01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     PPC_4424
DNA replication proteins [BR:ppro03032]
 Prokaryotic type
  DNA Topoisomerases
   PPC_4424
DNA repair and recombination proteins [BR:ppro03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      PPC_4424
SSDB
Motif
Pfam: DNA_topoisoIV DNA_gyraseA_C
Other DBs
NCBI-ProteinID: BAO63771
Position
complement(4948136..4950805)
AA seq 889 aa
MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMSELGNDWN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM
RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTKIPNLLVNGSSGIAVGMAT
NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGREGIIEAYRTGRGRI
YMRARSIIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD
GMRVVIELRRGEVPEVILNNLYAQTQLQAVFGINIVALIDGRPRILNLKDLLEAFVRHRR
EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALISTPWESSA
VMTMVERAGADSCRPENLDPQYGLRDGKYFLSPEQAQAILELRLHRLTGLEHEKLLAEYQ
EILNQIGELIRILNSATRLMEVIREELEVIRAEYGDVRRTEILDARLDLTLGDMIPEEER
VVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFSSKGKV
YWLKTYEIPEASRAARGRPLVNLLPLDEGEYITTMLPVEEYTEGHYIFMATANGTVKKTP
LESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKESDVRAMGRTAR
GVRGMRLAEGQKLISMLIPEEGSQILTASERGFGKRTAIGEFPEYKRGGQGVIAMVSNER
NGRLVGAVQVLDGEEIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKLASDETLVGLERV
QEPSEIEGEEFEGEEGAEFEGAVLDAVADTDEAAEGQQADAAGEEESQD
NT seq 2670 nt   +upstreamnt  +downstreamnt
atgggcgaactggccaaagaaatcctcccggtcaatatcgaagacgagctgaaacagtcc
tacctcgactacgcgatgagcgtaatcgtcgggcgggcactgcctgatgcgcgcgatggc
ttgaagcccgtgcaccggcgtgtgctgtacgcgatgagcgagctcggtaacgactggaac
aagccgtacaagaaatctgcccgtgttgtcggtgacgtgatcggtaagtatcacccgcac
ggtgataccgcggtgtacgacaccatcgttcgtatggcccagccattctccctgcgctac
ctgctggtagacggccagggtaacttcggttcggtcgacggcgacaacgcggcggccatg
cgatacaccgaagttcgtatgaccaagctggcgcacgagctgctggccgacctgcacaag
gaaaccgtggactgggtgccgaactacgacggcaccgagatgatcccggcggtcatgccg
accaagatccccaacctgctggtcaacggttccagcggtatcgccgtgggcatggcgacc
aacattccgccgcacaacctcggtgaagtcatcgatggttgcctggcgctgatcgacaat
cccgagctgactgtcgacgagctgatgcagtacatccccggcccggatttcccgaccgcg
gcgatcatcaacggtcgcgaaggcatcatcgaggcctatcgcaccggccgtggccgcatc
tatatgcgtgcccgctcgatcatcgaagacatcgacaaggttggcggccgccagcagatc
gtcatcaccgagctgccttaccaactgaacaaggcgcggttgatcgagaagatcgccgag
ctggtgaaagagaagaaactcgaaggcatcactgaacttcgcgatgagtccgacaaggac
ggtatgcgcgtcgtgatcgagctgcgtcgtggcgaagtgcctgaggtaatcctcaataac
ctctacgcccagacccagctgcaagcagtgttcggcatcaacatcgtggcgctgatcgac
ggccgtccgcggattctcaatctcaaggatctgctggaagccttcgttcgtcaccgtcgt
gaagtcgttacccggcgtaccgtgttcgagctgcgcaaggctcgtgagcgtggccacatc
cttgaaggccaggccgttgccctgtccaacatcgatccggtgattgccctgatcaaggcc
tcgccgacgccgtcggaagccaaggaagcgctgatcagcaccccttgggagtccagcgcg
gtcatgaccatggtcgagcgtgccggtgcggattcctgccgtccggaaaaccttgatccg
caatacggtctgcgcgacggcaagtacttcctgtccccggaacaggcacaagccattctg
gagttgcgtctgcaccgcctgactggcctggaacacgaaaaactgctggccgagtaccag
gagatcctcaaccagatcggcgagctgatccgcatcctcaacagcgccacgcgcctgatg
gaagtgatccgcgaagagctggaagtgatccgtgccgaatacggcgacgtgcgccgcacc
gagattctcgatgcccgcctcgacctgaccctgggtgacatgatcccggaagaagagcgt
gtggtgaccatttcccacggcggctacgccaagacccagccgctggctgcctaccaggcc
cagcgtcgtggcggtaaaggcaagtcggccacaggcgtcaaggatgaggactacatcgct
cacctgctggttgccaacagccacaccacgctgctgctgttctccagcaagggcaaggtg
tactggctgaagacttatgaaattcctgaagcatcccgtgcggcacgcggtcgtccgctg
gtcaacctgctaccgctggatgagggtgaatacatcaccaccatgctgccggtagaggag
tacaccgaaggtcactacatcttcatggcgaccgccaacggcaccgtgaagaagaccccg
ctggagtccttcagccgtcagcgcagcgtgggtctgatcgctctggagctggacgaaggc
gacgtgctgatcagtgccgccatcaccgatggcgagcgtgaagtcatgctgttctccgac
ggaggcaaggtcactcgcttcaaggagtccgacgtgcgcgccatgggtcgtaccgctcgc
ggtgtgcgcggcatgcgcctggcggaaggccagaagctgatttccatgctgattccggaa
gaaggcagccagatcctcaccgcctccgagcgtggtttcggcaagcgtaccgccattggc
gagttccccgagtacaagcgtggcggccagggcgttatcgccatggtcagcaacgagcgt
aacggtcgcctggttggcgcggtgcaggtgctggatggtgaggagatcatgctgatttcc
gatcagggcaccctggtgcgtactcgtgtcgacgaagtgtcgagcctgggccgtaacact
caaggtgtgaccctgatcaagctggccagcgatgaaaccctggtgggcctggagcgggtg
caggagccatcggaaatcgagggcgaagagttcgaaggtgaagagggtgctgaattcgag
ggagccgtgctggatgcggttgccgataccgatgaggcagccgaaggccaacaggcagac
gccgcaggcgaagaagagtcgcaagactaa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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