KEGG   Pseudomonas protegens Cab57: PPC_4975
Entry
PPC_4975          CDS       T03613                                 
Name
(GenBank) cysteine desulfurase
  KO
K04487  cysteine desulfurase [EC:2.8.1.7]
Organism
ppro  Pseudomonas protegens Cab57
Pathway
ppro00730  Thiamine metabolism
ppro01100  Metabolic pathways
ppro01240  Biosynthesis of cofactors
ppro04122  Sulfur relay system
Brite
KEGG Orthology (KO) [BR:ppro00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    PPC_4975
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04122 Sulfur relay system
    PPC_4975
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ppro03016]
    PPC_4975
   03029 Mitochondrial biogenesis [BR:ppro03029]
    PPC_4975
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ppro02048]
    PPC_4975
Enzymes [BR:ppro01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.1  Sulfurtransferases
    2.8.1.7  cysteine desulfurase
     PPC_4975
Transfer RNA biogenesis [BR:ppro03016]
 Eukaryotic type
  tRNA modification factors
   Thiolation factors
    PPC_4975
 Prokaryotic type
    PPC_4975
Mitochondrial biogenesis [BR:ppro03029]
 Mitochondrial quality control factors
  Regulator of mitochondrial biogenesis
   Proteins involved in Fe-S cluster biogenesis
    PPC_4975
Prokaryotic defense system [BR:ppro02048]
 DNA phosphothiolation system
  Sulfur modification proteins
   PPC_4975
SSDB
Motif
Pfam: Aminotran_5 Beta_elim_lyase DegT_DnrJ_EryC1 Cys_Met_Meta_PP
Other DBs
NCBI-ProteinID: BAO64322
Position
complement(5534028..5535242)
AA seq 404 aa
MKLPIYLDYSATTPVDPRVAQKMSECLLVDGNFGNPASRSHVFGWKAEESVENARRQVAD
LVNADPREIVWTSGATESDNLAIKGVAHFYHTKGKHLITSKIEHKAVLDTMRQLEREGFE
VTYIEPGEDGLITPAMVEAALRDDTILVSIMHVNNEIGTINDIAAIGELTRSKGVLFHVD
GAQSTGKVDIDLQALKVDLMSFSAHKTYGPKGIGALYVSRKPRVRLEATMHGGGHERGMR
SGTLATHQIVGMGEAFRVAKEDMAAENLRIKALSDRFYKQVEHLEELYINGSMTARVPHN
LNLSFNYVEGESLIMALKDLAVSSGSACTSASLEPSYVLRALGRNDELAHSSIRFTFGRF
TTEEEIDYAAQKVCEAVTKLRALSPLWDMYKDGVDISKIEWAAH
NT seq 1215 nt   +upstreamnt  +downstreamnt
atgaaattgccgatttaccttgattactcagcgaccaccccggttgatccacgcgtcgcg
cagaaaatgagtgaatgcctgctggtcgacgggaacttcggtaacccggcgtcccgctct
cacgtgtttggctggaaagccgaagagtcggtggaaaacgcccgtcgccaagtggccgac
ctggttaatgccgacccgcgtgaaatcgtctggacttccggtgctaccgaatccgacaac
ctggcaatcaagggtgtcgcgcatttctaccacaccaagggcaagcacctgatcacctct
aagatcgagcacaaggctgtcctggacaccatgcgccaactcgagcgtgaaggcttcgaa
gtgacctacatcgagccgggtgaagacggcctcattactccggccatggtcgaagcagcc
ctgcgtgacgacaccatcctggtttcgatcatgcatgtgaacaacgagatcggcaccatc
aacgacatcgctgccatcggcgagctgacccgctccaagggcgtgttgttccacgtcgac
ggcgctcagtccaccggcaaggtcgacatcgacctgcaggccctgaaggtcgacctgatg
tccttctccgcccacaagacctacggcccgaaagggatcggcgcgctgtacgtcagccgc
aagcctcgcgtgcgcctggaagccaccatgcacggcggtggtcacgaacgcggcatgcgc
tccggcaccctggctactcaccagatcgtcggcatgggcgaagccttccgcgtggccaag
gaagacatggctgccgagaacctgcgcatcaaggccctgagcgaccgcttctacaagcag
gtcgagcacctggaagagctgtacatcaacggcagcatgactgctcgcgtaccgcacaac
ctgaacctgagcttcaactacgttgagggcgagtcgctgatcatggccctcaaggacctg
gcagtgtcttccggttcggcctgtacttcggcctccctggagccttcctacgtgctgcgt
gccctgggtcgcaacgacgagctggctcacagctcgatccgcttcaccttcggtcgcttc
accactgaagaagaaatcgattacgcggcgcagaaagtctgcgaagccgttaccaagctg
cgcgctctgtcgccgctgtgggacatgtacaaagatggcgtcgatatctcgaagatcgag
tgggcggcgcactga

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (27)   

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