KEGG   Pseudomonas protegens Cab57: PPC_6128
Entry
PPC_6128          CDS       T03613                                 
Name
(GenBank) RNA polymerase-binding protein DksA
  KO
K06204  RNA polymerase-binding transcription factor
Organism
ppro  Pseudomonas protegens Cab57
Brite
KEGG Orthology (KO) [BR:ppro00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ppro03000]
    PPC_6128
   03021 Transcription machinery [BR:ppro03021]
    PPC_6128
   03009 Ribosome biogenesis [BR:ppro03009]
    PPC_6128
Transcription factors [BR:ppro03000]
 Prokaryotic type
  Other transcription factors
   Others
    PPC_6128
Transcription machinery [BR:ppro03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription elongation factors
     PPC_6128
Ribosome biogenesis [BR:ppro03009]
 Prokaryotic type
  rRNA transcription factors
   PPC_6128
SSDB
Motif
Pfam: DksA_CC zf-dskA_traR
Other DBs
NCBI-ProteinID: BAO65475
Position
complement(6765384..6765746)
AA seq 120 aa
MNEAQQGFFRQLLLAQRSDLQERIAGEFDQLREQEPHSDPADIGSAEEQRQWQLRLLERE
KKLLDKIDEALERLARGEYGWCRDTGEPIGLKRLLLRPTATLCIEAKERQELRERHQRAL
NT seq 363 nt   +upstreamnt  +downstreamnt
atgaacgaagcccagcagggcttctttcgccagctgctgctggcccagcgcagtgatctg
caggagcgcattgccggcgagttcgaccagctgcgcgagcaggaaccccacagcgacccc
gccgacatcggcagtgccgaagagcagcgccagtggcaactgcgcctgctggagcgggaa
aagaagcttctggacaagatcgacgaagccctggagcgcctggcccgtggcgaatacggc
tggtgccgcgacaccggcgagcccatcggcctcaagcgcctgctgctgcggcccaccgcc
accctgtgtatcgaagccaaagaacgccaagagctgcgcgaacgccatcaacgggcgctt
tga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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