KEGG   Pan paniscus (bonobo): 100973046
Entry
100973046         CDS       T02283                                 
Symbol
PABPC4L
Name
(RefSeq) polyadenylate-binding protein 4-like isoform X1
  KO
K13126  polyadenylate-binding protein
Organism
pps  Pan paniscus (bonobo)
Pathway
pps03015  mRNA surveillance pathway
pps03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pps00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    100973046 (PABPC4L)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100973046 (PABPC4L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pps03019]
    100973046 (PABPC4L)
   03041 Spliceosome [BR:pps03041]
    100973046 (PABPC4L)
Messenger RNA biogenesis [BR:pps03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     100973046 (PABPC4L)
   mRNA cycle factors
    Stress granule specific factors
     100973046 (PABPC4L)
Spliceosome [BR:pps03041]
 Complex C
  Other components
   Complex C specific factors
    100973046 (PABPC4L)
SSDB
Motif
Pfam: RRM_1 RRM_5 Nup35_RRM RRM_7 RRM_occluded MARF1_RRM1 RRM_3 Nup35_RRM_2 RRM_8 HTH_58
Other DBs
NCBI-GeneID: 100973046
NCBI-ProteinID: XP_014200225
Position
4:complement(126493717..126529830)
AA seq 370 aa
MNVAAKYRMASLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQ
LADAQKALDTMNFDIIKGKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSA
FGKILSSKVMSDDQGSKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREA
ELRSKASEFTNIYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSH
EAAKKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRGCQGVKLYIKNL
DDTIDDEKLRNEFSSFGSISRVKVMQEEGQSKGFGLICFSSPEDATKAMTEMNGRILGSK
PLSIALAQRH
NT seq 1113 nt   +upstreamnt  +downstreamnt
atgaatgtagcagccaagtaccgcatggcctccctgtatgtgggtgacttacatgcagat
gtcaccgaggacctgctgttcaggaagttcagcactgtggggcctgtgctgtccatccgc
atttgcagggaccaggtcacccgccgctctctgggctatgcctacgtgaacttcttgcag
ctggctgatgcccagaaggcgctggacacaatgaactttgacatcataaaaggcaaatcc
atccgtctcatgtggtctcagcgcgatgcctacttgaggagatctggaattgggaacgta
ttcatcaagaatctggacaaatctatcgataacaaaaccctttatgaacatttttcagct
tttggaaagatcctttcctccaaggtgatgagtgatgatcaaggctccaagggctatgca
tttgtgcactttcagaaccagagtgctgcagacagggccattgaggagatgaatggaaaa
ctactcaagggctgcaaggtgtttgttggcagattcaaaaaccgaaaagatcgtgaagct
gaactcagaagcaaagccagtgaattcaccaacatttacatcaaaaactttggaggtgac
atggatgatgagagattgaaggacgttttcagcaaatatggcaaaactctgagtgttaag
gtgatgacagattccagtgggaaatccaaaggctttggctttgtgagttttgatagccat
gaggctgccaagaaagctgttgaagaaatgaatggaagggacataaatgggcagctgatt
tttgtaggccgggctcaaaagaaagtagagcgacaggctgagttaaagcaaatgtttgag
cagctgaaaagggaacgaattcgtgggtgccagggggtaaagctctatattaagaacctt
gatgacaccatcgatgatgaaaaactacgaaacgaattttcttcatttggatcaattagc
agagttaaggtaatgcaggaagaggggcagagcaaagggtttggcttgatctgcttctcc
tctcctgaggatgctactaaagcaatgactgagatgaatggccgcatcttgggctccaaa
cctcttagcattgccttggcccagagacactag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (22)   

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