KEGG   Pseudomonas versuta: AOC04_16750
Entry
AOC04_16750       CDS       T04081                                 
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
ppsy  Pseudomonas versuta
Pathway
ppsy03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ppsy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AOC04_16750
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppsy03019]
    AOC04_16750
   03016 Transfer RNA biogenesis [BR:ppsy03016]
    AOC04_16750
Enzymes [BR:ppsy01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     AOC04_16750
Messenger RNA biogenesis [BR:ppsy03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     AOC04_16750
Transfer RNA biogenesis [BR:ppsy03016]
 Prokaryotic type
  tRNA degradation factors
   AOC04_16750
SSDB
Motif
Pfam: RNase_PH PNPase RNase_PH_C S1 KH_1 S1_2 KH_2
Other DBs
NCBI-ProteinID: ALE89732
Position
complement(3726365..3728470)
AA seq 701 aa
MNPVIKKFQFGQSTVTLETGRIARQASGAVLVTVDDDVSVLVTVVGSKQADPGKGFFPLS
VHYQEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGFMNEVQVVCTVLST
SKKTDPDVAAMIGTSAALAISGIPFDGPIGAARVAYHESTGYLLNPTYEQLAASSLDMVV
AGTSEAVLMVESEAKELTEDQMLGAVLFAHDEFQVVIQAVKELAAEAAKPTWDWAAAPEA
TELLAAIRVEFGEAISQAYTLTVKHERYARLGELKDQVVAKLSGEEGQPTSAEVKAAFGE
IEYRTVRENIVNGKPRIDGRDTKTVRPLNIEVGVLPKTHGSALFTRGETQALVVATLGTA
RDAQLLDTLEGEKKDPFMLHYNFPPFSVGECGRMGGAGRREIGHGRLARRSVQAMLPAAD
VFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGEKFAVLT
DILGDEDHLGDMDFKVAGTAKGVTALQMDIKIKGITEEIMEIALGQALDARLNILGQMNQ
IIAVSRNELSANAPTMIAMKIDTDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIFG
ETKEAAEAARQRVLGITAEAEIGKIYTGKVERIVDFGAFVNILPGKDGLVHISMLSDARV
EKVTDILKEGQEVEVLVLDVDNRGRIKLSIKDVAAAKASEA
NT seq 2106 nt   +upstreamnt  +downstreamnt
gtgaacccggttatcaaaaaattccagttcggtcagtcgaccgtcaccctcgagactggc
cgtatcgcccgtcaggcctccggcgcagtattggtcaccgttgacgacgacgtcagcgtg
ttggtgactgttgtcggttccaagcaagctgatccaggcaagggcttcttccctctgtct
gttcactaccaagaaaaaacctacgccgcgggtaaaatcccgggcggtttcttcaagcgt
gaaggtcgcccttccgaaaaagaaaccctgacttcgcgtctgatcgaccgtccgatccgt
ccgctgttcccagaaggcttcatgaacgaagtgcaggttgtctgcaccgttctgtccacc
agcaagaaaaccgatccggacgtcgctgcgatgatcggtacctcggctgcgctggccatc
tccggcatcccttttgatggtccgatcggtgctgcccgcgttgcttaccacgaaagcacc
ggctacctgctgaacccgacttacgagcaactggccgcttccagcctggacatggttgtt
gccggtacttcggaagctgtgttgatggttgaatcggaagccaaagagctgaccgaagac
cagatgctgggcgcggtattgtttgcccacgacgaattccaggtcgttatccaggctgtt
aaagagctggctgccgaagctgcaaaaccaacctgggactgggctgctgctccagaagct
accgaactgttggccgctatccgcgtcgagttcggcgaagcgatctcccaggcttacaca
ctgaccgtcaagcacgagcgttatgcacgtctgggcgagctgaaagaccaggttgttgcc
aagctgtccggtgaagaaggccagccgacttctgctgaagtcaaagctgcattcggcgaa
atcgaataccgcaccgttcgcgaaaacatcgttaacggcaagccgcgtatcgatggccgc
gacaccaaaaccgtccgtcctctgaacatcgaagtcggcgttctgccaaaaacccacggt
tcggctctgttcacccgtggcgaaactcaggctctggtcgttgcaactctgggtactgcc
cgtgacgcacaactgctggacaccctggaaggcgagaagaaagacccgttcatgctgcac
tacaacttccctccgttctcggtaggtgagtgtggtcgtatgggtggtgccggtcgtcgc
gaaatcggtcacggccgtttggcccgtcgttcggttcaggccatgctgcctgctgctgat
gtgttcccgtacaccatccgtgttgtatcggaaatcaccgagtccaacggttccagctcc
atggcttcggtctgcggcgcttccctggcactgatggacgctggtgtgccgatgaaagca
ccggtagccggtatcgccatgggtctggttaaagaaggcgagaagttcgcagttctgacc
gacatcctgggtgacgaagatcacctgggcgacatggacttcaaagtagccggtaccgct
aaaggtgttaccgcgctgcagatggacatcaagatcaaaggcatcaccgaagaaatcatg
gagatcgcactgggccaggccctggacgctcgcctgaacatcttgggtcagatgaaccag
atcattgccgtatcgcgtaatgaattgtcggccaacgctccgaccatgattgcgatgaaa
atcgacaccgacaaaatccgtgatgttatcggtaaaggcggcgcgaccatccgtgcaatc
tgtgaagaaaccaaggcttcgatcgatatcgaagacgacggttcgatcaagatcttcggt
gaaaccaaggaagctgcagaagcggcgcgtcagcgcgttctgggcatcactgcagaagcc
gagatcggcaagatctacaccggtaaggttgagcgtatcgtcgacttcggcgcattcgta
aacatcctgccaggcaaagacggcctggttcacatctccatgctgagcgacgctcgtgtt
gagaaagtgactgacattcttaaagaaggtcaggaagtggaagtactggtactggacgtg
gacaaccgcggccgtatcaagctctccatcaaggacgtagcagcagccaaggcttcggaa
gcttaa

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