KEGG   Pseudomonas putida S16: PPS_4970Help
Entry
PPS_4970          CDS       T01570                                 

Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
ppt  Pseudomonas putida S16
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:ppt00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    PPS_4970
Enzymes [BR:ppt01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     PPS_4970
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     PPS_4970
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(5641598..5642410)
Genome map
AA seq 270 aa AA seqDB search
MPELPEVETTRRGIAPHLEGQRVSRVVVRDRRLRWPIPEDLDVRLSGQRIVSVERRAKYL
LINAEVGTLISHLGMSGNLRLVELGLPAAKHEHVDIELESGLMLRYTDPRRFGAMLWSLD
PLNHELLLRLGPEPLTDLFDGERLFQLSRGRSMAVKPFIMDNAVVVGVGNIYATEALFAA
GIDPRREAGGISRARYLKLAIEIKRVLAAAIEQGGTTLRDFIGGDGQPGYFQQELFVYGR
GGQPCKVCDTELREVKLGQRASVYCPRCQR
NT seq 813 nt NT seq  +upstreamnt  +downstreamnt
atgccggaattgccagaagtagaaaccacccggcgcggtattgcgccccatctggaaggc
cagcgcgtcagccgggtggtggtacgtgaccggcgcctgcgctggccgattccggaagac
ctggatgtgcgcctgtcggggcagcgcatcgtcagtgtcgagcggcgcgccaagtatctg
ttgatcaatgccgaggtcggcaccctgatcagtcacctgggcatgtcgggcaacctgcgc
ctggtcgaactgggcttgccggcggccaagcatgagcatgtggatatcgagcttgagtcg
gggttgatgctgcgctacaccgacccgcgccgctttggcgcgatgctgtggagcctggac
ccgctcaatcacgaactgctgctgcgcctggggcctgaaccgctgaccgacctgttcgac
ggcgagcgactgttccagttgtcccgtgggcggtcgatggcggtcaagccgttcatcatg
gataacgcggtagtggtgggggtgggcaacatttacgccaccgaggcgctgtttgccgct
ggcatcgacccccgtcgggaagcgggcgggatttcccgggcgcgctacttgaagctggcg
atcgagatcaagcgtgtgctggcggcggcgatcgaacagggcggcaccacgctacgcgac
ttcatcggtggtgatgggcagccggggtacttccagcaggaattgttcgtgtacgggcgg
ggcgggcagccgtgcaaggtgtgtgacacggagttgcgcgaggtgaagctggggcagagg
gcgagtgtgtattgcccgcgttgccagcgctga

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