KEGG T00114: PP

Pseudomonas putida KT2440: PP_0654

Entry

PP_0654 CDS T00114

Gene name

mdh

Definition

malate dehydrogenase

Orthology

K00024

malate dehydrogenase [EC:1.1.1.37]

Organism

ppu Pseudomonas putida KT2440

Pathway

ppu00020	Citrate cycle (TCA cycle)
ppu00620	Pyruvate metabolism
ppu00630	Glyoxylate and dicarboxylate metabolism
ppu00680	Methane metabolism
ppu01100	Metabolic pathways
ppu01110	Biosynthesis of secondary metabolites
ppu01120	Microbial metabolism in diverse environments

Module

ppu_M00009	Citrate cycle (TCA cycle, Krebs cycle)
ppu_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ppu_M00012	Glyoxylate cycle
ppu_M00168	CAM (Crassulacean acid metabolism), dark

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:ppu00020]
Metabolism; Carbohydrate metabolism; Pyruvate metabolism [PATH:ppu00620]
Metabolism; Carbohydrate metabolism; Glyoxylate and dicarboxylate metabolism [PATH:ppu00630]
Metabolism; Energy metabolism; Methane metabolism [PATH:ppu00680]

SSDB

Motif

Pfam:

Ldh_1_C Ldh_1_N Auxin_BP RTX Glyco_hydro_4

Other DBs

NCBI-GI:

NCBI-GeneID:

JCVI-CMR:

UniProt:

Position

762063..762899

AA seq 278 aa
MDVQGELAQGKALDVWQAAVDSGSDTHVHGGAKAEMLEGSELVVITAGVPRKPGQSRQDV
LSTNLPILDSIMADIKHHAPTATVLVVSNPVDVLTYRAWSVSGQGRDKVFGQAGVLDTAR
MKCFIAEQTGFSARDITALVLGGHGDSMVPLMRYCQIGSVPLSHFLSSEQIEQIVERTRK
GGGEILGLKKTGSACDAPGVAIAQMVDAIANGRNRILPAVAILEGEYGRTDIAMGVPCVL
AEKGLARIIELPLDAQEQAMFDHSADQVARDIAEMKAL

NT seq 837 nt +upstreamnt +downstreamnt
atggacgtgcagggtgagctggcgcagggcaaggcgctggacgtttggcaggcggctgtg
gattcaggttccgatacccatgttcacggcggggccaaagccgagatgctggagggttcc
gagctggtggtgatcacggcgggcgtgccgcgcaagcccggccagtcgcgccaggatgta
ttgagtaccaacctgccaatcctcgacagcatcatggcggatatcaagcaccacgcgccg
actgcgacggtgctggtggtgtccaacccggtcgatgtgctcacctaccgcgcctggagc
gtcagcgggcaggggcgcgacaaggtgttcgggcaggcgggggtgctggataccgcgcgc
atgaagtgcttcatcgccgagcaaaccgggttttctgcacgggatatcacggcgttggtg
ctgggcgggcatggcgacagcatggtgccgctgatgcgctactgccagattggctcggtg
ccgttgtcgcacttcctgtccagcgagcagatcgaacagattgtcgagcgcacccgtaag
ggcggcggcgagattctggggttgaagaagacggggagcgcctgcgatgcaccgggcgtg
gccattgcgcagatggtcgatgcgatcgccaatgggcggaaccgtattttgccggcggtg
gcgattcttgagggcgagtatgggcgaacggatatcgccatgggggtgccctgcgtactg
gcggagaaggggctggcgcggattatcgagttgccgctggatgcgcaggagcaggcgatg
ttcgaccactctgcagaccaggtggcgcgggatattgccgagatgaaggcgttgtag

All links

Pathway (11)   
   KEGG PATHWAY (7)   
   KEGG MODULE (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JCVI-CMR (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (31)   

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