KEGG P.putida: PP

Pseudomonas putida KT2440: PP_1126

Entry

PP_1126 CDS P.putida

Definition beta-agarase

Class

SSDB

Motif Pfam: Glyco_hydro_42

Other DBs NCBI-GI: 26987862
NCBI-GeneID: 1045259
JCVI-CMR: PP_1126
UniProt: Q88NS8

Position 1288726..1291074

AA seq 782 aa
MRCRRSGGKFPDRRSTCAGALSITRLGPIRVLKESLSLMIRRTLPAVFALLCSSPLLAGQ
QTLFSFVRPASVVNVATVDASMPQYNAEQTAEGEVLRRVVFNPAQQPTLRLSPQSGVWDW
SAGQFLTLRLQSAMDWALTVDVTVQGSDGRVLTSRIDLPAGPAQTVMVPLTASSPLDQGM
RAGPPMPWNHGGQRLLLTSSAGAVDLKQVTSVSLSIPSPKVAQSLLIERVGIQDDDQAYR
AAYHELIDAYGQSTRGNWPEKVSSDEQLKAADTREQQQLKGWLAERGKQKLDAYGGLVGG
PAFAAKGFFRTEKRDGRWYLVTPDGHPFYSLGVNAVAADGGRTYVAGREGMFKALPAEGD
ALAAFYGESNNDDGNASSQGRNFKQGRWFDFYAANLQRTYGKPCRPAVEGQPADCAPPVL
DADRWQAHALDRLQAWGFNTVGNWSEPALGQARRMPYTLPLSIVGDYASISTGMDWWGRM
PDPFDPRFAMATERAVAIAARDHRDDPWLIGYFADNELAWAAPGSDPKSRYGLAYGTLRL
TTDVPAKRAFLKQLRDKYRNQEGLSKAWGIELTAWELMEDPGFEAPLPDPEHPEIERDYQ
HFQRVFAETYFKTISDSLKWHAPNHMLLGGRYAVSTPEAVKACAEFCDVLSFNFYTLKPQ
DGYDFARLAELDKPVLVSEFQFGSRDRGPFWPGPLELAREEDRGPAYANFLKAAMAQPMI
VGAHWFQYLDQPASGRLLDGENGHLGLVAITDMPYPGFVDAVRKSNLQTMNQLRAELEKP
AP

NT seq 2349 nt +upstreamnt +downstreamnt
atgcgctgccgccgttccggcgggaaatttcctgatcgccggagcacttgcgccggcgca
ttgtccattactcgtcttgggcccatcagggtcctgaaggagagcctcagccttatgatc
cgccgcaccctgcccgccgtattcgccttgttgtgcagttcgcccttgctggccgggcag
caaacgctgttcagcttcgtgcgcccggcttcggtggtcaatgtggcgacggtggatgcc
agcatgccgcagtacaacgcggaacaaacggccgagggcgaggtgttgcggcgtgtggtg
ttcaacccggcccagcagccgaccctgcgcctgagcccgcagagcggggtgtgggactgg
tccgccgggcagttcctgaccttgcgcctgcaaagtgccatggattgggcattgaccgtg
gatgtcacagtgcaaggcagcgatggccgcgtcttgaccagccgtatcgacctgcccgct
ggccccgcgcaaaccgtgatggtgcccctgacggccagttcgccgctggaccagggcatg
cgcgccggcccgccgatgccctggaaccatggtggtcagcgcctccttttgaccagcagc
gccggagcagtcgacctcaagcaggtgacctcggtcagcctgagcatccccagccccaag
gtggcgcagagcctgctgatcgagcgtgtcggtatccaggatgacgaccaggcgtacagg
gcggcctaccacgagctgattgatgcttatggccagtcgactcgcggtaactggcccgag
aaggtatccagtgacgagcagctcaaggcggccgatacccgtgaacagcaacagctcaag
ggctggttggcagagcgcggcaagcagaaactggacgcctacggtggtctggtgggtggg
ccggcctttgcagccaagggtttctttcgcactgaaaagcgtgatggccgctggtacctg
gtaacgccggatgggcacccgttctattccctgggggtgaacgccgtggcggcagacggc
gggcgtacctatgtcgccgggcgcgaaggcatgttcaaggccttgcccgctgagggcgat
gcactggccgctttctatggcgaaagcaacaacgacgatggcaatgcctcgtcgcaaggg
cgcaatttcaagcaggggcgctggttcgacttctacgccgccaacctgcagcgtacctat
ggcaaaccctgccggcccgcagtggagggccagccagccgattgcgcgccgccggtgctg
gatgccgaccgctggcaggcgcatgcgcttgatcgccttcaggcctgggggttcaacacc
gttggcaactggagcgagccggcgcttggccaagccagacgcatgccgtataccttgccg
ctgtcgatcgtaggcgactacgccagcatcagcactggcatggactggtggggccgcatg
cccgacccgttcgacccgcgttttgccatggccaccgagcgtgccgtggccatcgccgct
cgtgatcaccgtgacgacccttggctcatcggctacttcgccgataacgaactggcctgg
gccgcccctggaagcgaccccaagagccgttatggcctggcctacggcaccttgcgcctg
accaccgacgtgccagccaaacgcgcattcctcaagcagttgcgcgacaagtatcgcaac
caggaagggttgtccaaggcctggggcatcgaactgaccgcctgggaactcatggaagat
cctggcttcgaggcgccgttgcctgacccggagcacccggaaatcgaacgtgactaccag
cacttccagcgggtatttgccgagacctacttcaagaccatttccgattcgttgaaatgg
catgcgcccaatcacatgctcctgggtggccgctatgcggtcagtacaccggaggcggtc
aaggcctgtgccgagttctgcgatgtactgagcttcaacttctataccctcaagccgcag
gacggctacgactttgcccgcctggcagagctggacaagccggtgctggtgtccgagttc
cagttcggctcgcgtgatcgcgggccgttctggccggggccattggagctggcgcgggaa
gaggatcgcggcccggcctacgcaaacttcctcaaggccgccatggcgcagccgatgatc
gttggcgcgcactggttccagtacctcgaccaaccggccagcggtcgcctgctcgatggt
gagaacggccacctcgggctggtggcgattaccgatatgccctatccagggtttgtcgat
gccgtgcgcaaaagcaatctgcaaaccatgaaccaactgcgtgccgagctggaaaaaccg
gccccctga

All links

Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   JCVI-CMR (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)

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