KEGG   Pseudomonas putida KT2440: PP_1525Help
Entry
PP_1525           CDS       T00114                                 

Gene name
dapE
Definition
(RefSeq) succinyl-diaminopimelate desuccinylase
  KO
K01439  succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
Organism
ppu  Pseudomonas putida KT2440
Pathway
ppu00300  Lysine biosynthesis
ppu01100  Metabolic pathways
ppu01120  Microbial metabolism in diverse environments
ppu01230  Biosynthesis of amino acids
Module
ppu_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:ppu00001]
 Metabolism
  Amino acid metabolism
   00300 Lysine biosynthesis
    PP_1525 (dapE)
Enzymes [BR:ppu01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.18  succinyl-diaminopimelate desuccinylase
     PP_1525 (dapE)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Peptidase_M20 M20_dimer Glyco_transf_20 BNR_2
Motif
Other DBs
NCBI-GeneID: 1045488
NCBI-ProteinID: NP_743682
UniProt: Q88MP5
Position
complement(1729936..1731087)
Genome map
AA seq 383 aa AA seqDB search
MTAPAELSPTLQLACDLIRRPSVTPVDADCQAQMMNRLGAVGFQLEPMRIEDVDNFWATH
GSQDGPVLCFAGHTDVVPTGPVQQWQHEPFEALIDADGMLCGRGAADMKGSLASMVIASE
RFVQDYPNHRGKVAFLITSDEEGPAHHGTKAVVERLKARNERLDWCIVGEPSSTTLLGDV
VKNGRRGSLGAKLTIRGKQGHVAYPHLARNPIHLAAPALAELAAEHWDEGNAFFPPTSFQ
ISNLNSGTGATNVVPGELTALFNFRFSTESTVEGLQARVSAILDKHELDWSVDWALSGLP
FLTEPGELLDAVAASIKGVTGRDTQPSTSGGTSDGRFIATMGTQVVELGPVNATIHQVDE
RILASDLDLLTEIYYQTLVRLLA
NT seq 1152 nt NT seq  +upstreamnt  +downstreamnt
atgacggcccctgccgagctctcgcctacccttcaactggcctgcgacctgatccgtcgc
ccctcggtcacccccgtcgacgccgattgccaggcgcagatgatgaaccgtctgggcgcc
gtcggtttccagctggagccgatgcgcattgaagacgtcgacaacttctgggccacccac
ggcagccaggacggcccggtactgtgttttgccggccacaccgacgtggtgcctaccggc
ccggtccagcaatggcagcatgaacccttcgaggcactgatcgacgccgacggcatgctc
tgcggccgtggcgccgccgacatgaagggcagcctggcatccatggtcatcgccagcgag
cgcttcgtgcaggactacccgaaccaccgcggcaaggtcgcgtttctgatcaccagcgac
gaggaaggccccgcccaccacggcaccaaagcggtggtcgagcgcctgaaagcgcgcaac
gagcgcctggactggtgcatcgtcggcgaaccgtccagcaccaccttgctgggtgacgtg
gtcaagaacggtcgccgcggttcgctgggcgccaagctgaccatacgcggcaaacagggc
catgtggcctacccgcacctggcgcgcaacccgatccatctggccgccccggccctggcg
gaactggctgccgagcactgggacgaaggcaatgcgttcttcccgccaaccagcttccag
atctccaacctcaactccggcaccggcgccaccaacgtggtcccgggcgagctgaccgcg
ctgttcaacttccgcttctctaccgagtccaccgtcgaaggcctgcaggcccgagtgtcg
gcgattctcgacaagcatgaactggactggtcggtcgactgggcactgtcgggcctgccg
ttcctgaccgaaccaggcgagctgctcgacgccgtggcggccagcatcaagggcgtcacc
ggtcgcgatacccagccctccaccagcggcggcacttccgatggccgcttcatcgcaacc
atgggcactcaggtggtcgaactcggcccggtcaacgccaccatccaccaggttgacgag
cggatcctggccagcgacctcgatctgctgaccgaaatctactaccagaccctggtccgg
ttgctcgcctga

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