KEGG   Pseudomonas putida KT2440: PP_2110
Entry
PP_2110           CDS       T00114                                 
Name
(GenBank) putative ribosomal large subunit pseudouridine synthase
  KO
K06177  tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
Organism
ppu  Pseudomonas putida KT2440
Brite
KEGG Orthology (KO) [BR:ppu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ppu03009]
    PP_2110
   03016 Transfer RNA biogenesis [BR:ppu03016]
    PP_2110
Enzymes [BR:ppu01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     PP_2110
    5.4.99.29  23S rRNA pseudouridine746 synthase
     PP_2110
Ribosome biogenesis [BR:ppu03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    PP_2110
Transfer RNA biogenesis [BR:ppu03016]
 Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    PP_2110
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: AMM02841
UniProt: A0A140FW58
Position
2405840..2406745
AA seq 301 aa
MNVSSPAMTTPFDPARQQASTVCLPPGNWVTVLDCLCDHFKAIDRAQWLDRFARGRVLDA
KGQAVAADLPYKRGMRLHYFREVPNERPIPVQEVVLHVDEHLVVADKPHFLPVTPTGEYV
EQTLLRRLIRRLDNPHLVPLHRIDRHTAGLVLFSANPHSRSAYQRLFPERRIDKRYQAIA
AAMPQHAFPLVHKSRLVHGEPFFRMHEVEGEANSETLAEVLEKNGERWRYGLSPVTGKTH
QLRVHMAALGAGISNDPFYPQLLNEEDDYQRPLKLLAQSLRFEDPLSGKERYFESRLRLD
W
NT seq 906 nt   +upstreamnt  +downstreamnt
atgaacgtctcgagcccagccatgaccacgcctttcgaccccgcccgccagcaagccagt
acggtgtgcctgcctcctggtaactgggtgacggtgctcgattgcttgtgtgaccatttc
aaggccatcgaccgcgcccagtggcttgaccgctttgcccgtggccgggtgctggatgcc
aaggggcaggcagttgccgccgacctgccttacaagcgtggcatgcgtttgcattacttc
cgcgaagtgccgaacgaacggccgattccggtgcaggaggtggtgctgcatgtggacgag
cacctggtggtggccgataaaccgcatttcctgccggtgacgccgaccggtgaatacgtc
gagcagaccttgttgcgccgcctgatccgtcgcctggacaatccgcacctggtgccgttg
caccgcatcgaccggcacaccgccgggctggtgttgttttccgccaacccgcacagccgc
agcgcctaccagcggctgttccccgagcggcgtatcgacaagcgttaccaagccattgcc
gctgccatgccacagcatgcctttccgctggtgcacaaaagccgcctggtgcatggcgag
ccatttttccgcatgcatgaggtggagggtgaggccaacagtgaaaccctggccgaggtg
ttggagaagaacggtgagcgatggcgctatgggctgtcgccagtgaccggcaagacccat
cagttgcgtgtgcacatggcggctttgggggcagggatcagcaatgacccgttctatccg
caattgctcaacgaagaggatgactaccagcggccgctgaaactgctggcgcagagcctg
cgtttcgaggacccgctgagtggcaaagagcgctacttcgagagccgcttgcggttggac
tggtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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