KEGG P.putida: PP

Pseudomonas putida KT2440: PP_3119

Entry

PP_3119 CDS P.putida

Gene name dnaE2

Definition error-prone DNA polymerase (EC:2.7.7.7)

Orthology K02337 DNA polymerase III subunit alpha [EC:2.7.7.7]

Pathway ppu00230 Purine metabolism
ppu00240 Pyrimidine metabolism
ppu01100 Metabolic pathways
ppu03030 DNA replication
ppu03430 Mismatch repair
ppu03440 Homologous recombination

Class Metabolism; Nucleotide Metabolism; Purine metabolism [PATH:ppu00230]
Metabolism; Nucleotide Metabolism; Pyrimidine metabolism
[PATH:ppu00240]
Genetic Information Processing; Replication and Repair; DNA
replication [PATH:ppu03030]
Genetic Information Processing; Replication and Repair; Mismatch
repair [PATH:ppu03430]
Genetic Information Processing; Replication and Repair; Homologous
recombination [PATH:ppu03440]
Genetic Information Processing; Replication and Repair; DNA repair
and recombination proteins

SSDB

Motif Pfam: DNA_pol3_alpha PHP tRNA_anti DUF2117

Other DBs NCBI-GI: 161378129
NCBI-GeneID: 1043951
JCVI-CMR: PP_3119
UniProt: Q88I82

Position 3528202..3531282

AA seq 1026 aa
MNTPGYAELHCLSNFSFQRGASSADELFRRAREQGYQALAITDECTLAGIVRAWQAAKVH
QLRLIVGSEVQLCDGPKLVLLVENLTGYQNLCALITRARRRAEKGAYQLFRDDLLLHHQG
LLALWVAADSGDTATGAWLRSVFAERLWLAVHLHRGSDDAVRLQRLRALAADVGIRAVAC
GDVHMHVRGRRALQDCMTAIRQHCQVSEAGRFLFANGERHLRSQAQLAELYPLDLLAETL
VIARRCQFDLSELNYQYPRELVPEGHTPASWLRELCEQGMPLRWPDGPSGKVRDVLAKEL
GLIEELGYESYFLTVHDIVAFARSQRILCQGRGSAANSVVCFVLGITELDPMKHHLLFER
FLSRERNEPPDIDVDFEHDRREEVIQYVFRRYGRHRAALTAVVNTYHAAGAVRDVARALG
LPADQVDALAKCCGRWSDRIPDDQRLAEAGFEAGSPSLRRVLVLAGELIGFPRHLSQHPG
GFVISQQPLDQLVPVENAAMPERTVIQWDKDDLDMVGLLKVDVLALGMLSALRRCFDQLQ
HHRGRHLTLATIPSEDPATYAMISRAETMGVFQIESRAQMAMLPRLRPQKFYDLVIEVAI
VRPGPIQGDMVHPYLRRRLKQEPVTYPSPQLKEVFERTLGVPLFQEQVMELAMVAADYTP
GEADQLRRSMAAWKRHGGLEPHRERLVQGMLRNGYTLAFAERIFEQIKGFGSYGFPESHA
ASFALLCYASSWLKCHEPAIFTCALVNSWPMGFYSPDQLLQEARRQGIEVRPVDVCHSDW
DCTLEPDAEGTLAIRMGLRLVRGLAEADAKRVQQARSQRPWRNVEDLCLRAGLDARARAR
LADGGALRALASDRHQARWQVAAVQPQLPLFADVQALPEEPVQLPVPTVGEDLMADYQTL
GTTLGPHPLALLRARLRALGCRSSSELQGVEHGDNIAVAGLVVGRQRPQTASGVTFVTLE
DEHGMVNVVVWRALAERQRRALVGSQLLKVSGRLEQENGVRHLIARRLEDVSPLLQGLDV
RSRDFH

NT seq 3081 nt +upstreamnt +downstreamnt
atgaacaccccgggttatgccgagctgcattgcctttccaacttcagcttccagcgcggt
gcgtcgagcgccgacgagctgttccggcgtgcgcgcgagcagggctaccaggccttggca
atcactgacgaatgcacgctggccggtatcgtgcgcgcctggcaggcagccaaggtgcat
cagttgcggctgatcgttggcagcgaggtgcaattgtgcgacgggcccaagctggtgctg
ctggtcgaaaacctgacgggttaccagaacctgtgcgcgctgatcacccgtgcccggcgg
cgggcagagaagggggcgtaccagctgtttcgtgatgacttgctgctgcaccaccaaggc
ctgctggccttgtgggtggccgctgacagtggcgatactgctaccggcgcgtggctgcgc
agtgtgttcgctgagcgcctgtggctggccgtgcacctgcatcggggcagtgacgatgcc
gtgcgcctgcaacggttgcgggcactggcggctgatgtgggtatccgcgctgtggcctgt
ggcgacgtgcacatgcacgtgcgtggtcgccgtgccttgcaggactgcatgactgccatc
cgccagcattgccaggtgagcgaggccgggcgctttctgtttgccaatggcgaacggcac
ctgcgcagccaggcgcaactggccgagctgtatccgctcgacctgctggccgagaccctg
gtcattgcccggcgctgccagtttgacctgagcgaactgaactaccagtacccacgcgaa
ctggtgcccgaggggcataccccggcaagctggctgcgcgaattgtgcgagcaaggcatg
ccgctgcgctggccagacgggcccagtggcaaggtgcgtgatgtgcttgccaaggaactg
gggctgatcgaagagctgggctacgaaagctacttcctgacagtgcacgacattgtcgcc
ttcgcccgcagccagcgcattctatgccagggccgggggtcggcagccaactcggtggtg
tgcttcgtgctaggcatcaccgagcttgaccccatgaaacaccacctgctgttcgagcgc
ttcctgtcgcgcgagcgcaacgagccgccggacatcgacgtggacttcgagcacgaccgg
cgcgaggaggtgatccagtatgtgttccgtcgctatggccggcaccgggcggcgctcact
gcggtagtcaacacctaccatgccgccggtgcggtgcgggatgtggcgcgggcgctgggg
ctacctgccgatcaggtggatgccctggccaaatgttgtggtcgctggagcgatcgcata
cccgatgaccagcgcctggccgaggccggtttcgaagcgggcagcccttcgctgcggcgg
gtgctggtgctggccggcgaactgatcggcttcccccggcacctgtcacagcacccgggc
ggttttgtcatctcccagcaaccgctggaccagctggtgccggtggagaatgccgcgatg
ccggagcgcacggtgatccagtgggacaaggatgacctggacatggttggcctgctcaag
gtcgacgtactggcgttgggcatgctcagcgccttgcgtcgctgcttcgaccagctgcag
caccaccgtggccggcacctgaccctggcgaccatccccagcgaagacccggccacctac
gccatgatcagccgtgccgagaccatgggcgtgttccagatcgagtcacgcgcgcaaatg
gccatgttgccgcggctgcggccccagaagttctacgacctggtcatcgaggtcgccatc
gtccgccccgggccgatccagggcgacatggtgcacccgtacctgcgccggcgcctgaag
caggaaccggtgacgtatccgtcgccgcaactgaaggaagtgttcgaacgtaccttgggc
gtgccgctgttccaggagcaggtgatggagctggcgatggtcgcggccgactataccccg
ggcgaggccgaccagttgcgtcgcagcatggcagcctggaagcgccacggcggcctggaa
ccgcaccgcgaacggctggtgcagggcatgttgcgcaatggttacacgctggcgtttgcc
gagcgcatcttcgagcagatcaaggggtttggcagctatggcttccctgagtcgcatgcg
gccagctttgccttgctgtgctatgccagcagttggctgaagtgccatgagccggcgatt
ttcacctgtgcgttggtcaacagttggccgatgggcttctacagccctgatcagctgctg
caagaggctcgccgccaaggtatcgaggtacggccggtggatgtctgccacagcgactgg
gactgcaccctggagcctgatgctgagggcacccttgccattcgcatgggcctgcgactg
gtgcgtggcctggccgaagccgatgccaagcgcgtgcagcaggcgaggtcgcagcggccg
tggcgcaacgtcgaagacctgtgcctgcgcgccggcctggacgcacgggcccgtgcccgc
ctggctgatggcggtgcgctgcgcgccttggccagtgatcggcatcaggcgcgctggcag
gtggcggcggtgcagccgcagctgccgttgttcgccgatgtgcaggccttgcctgaagaa
ccggtgcaattgcccgtgccaaccgtgggcgaggacctgatggccgattatcaaaccctc
ggcactacgcttggcccacatccgctggcgctgttgcgcgctcgcctgagggcgctgggg
tgtcgcagctccagtgaattgcagggtgtggagcatggcgacaacattgccgtggccggg
ctggtggtgggccggcaacggcctcaaaccgccagcggtgtgaccttcgttactctggaa
gacgaacatggcatggtcaacgtggtggtgtggcgtgcgctggccgaacggcagcgacgg
gcgctggtgggttcgcagctgctcaaggtcagtgggcggttggagcaggagaatggggtg
cggcacctgattgcgcggcggttggaggatgtgagtccgctgctgcaagggctggatgtg
cgcagccgggattttcactga

All links

Pathway (6)   
   KEGG PATHWAY (6)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   JCVI-CMR (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (21)

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