KEGG T00114: PP

Pseudomonas putida KT2440: PP_4012

Entry

PP_4012 CDS T00114

Definition

isocitrate dehydrogenase

Orthology

K00031

isocitrate dehydrogenase [EC:1.1.1.42]

Organism

ppu Pseudomonas putida KT2440

Pathway

ppu00020	Citrate cycle (TCA cycle)
ppu00480	Glutathione metabolism
ppu01100	Metabolic pathways
ppu01110	Biosynthesis of secondary metabolites
ppu01120	Microbial metabolism in diverse environments
ppu01210	2-Oxocarboxylic acid metabolism
ppu01230	Biosynthesis of amino acids

Module

ppu_M00009	Citrate cycle (TCA cycle, Krebs cycle)
ppu_M00010	Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:ppu00020]
Metabolism; Metabolism of other amino acids; Glutathione metabolism [PATH:ppu00480]

SSDB

Motif

Pfam:

IDH DUF4115

Other DBs

NCBI-GI:

NCBI-GeneID:

JCVI-CMR:

UniProt:

Position

4522151..4524376

AA seq 741 aa
MPTRSKIIYTFTDEAPALATYSLLPIIEAFTASADIAVETRDISLAGRILAAFPEQLGAE
KQVGDHLAELGQLATTPEANIIKLPNISASVPQLKAAIKELQGKGFNIPDYADEPATAEE
KESRARYDRIKGSAVNPVLREGNSDRRAPLSVKNYARKHPHKMGAWAADSKSHVAHMTQG
DFYGSEKAALIEADDSLRIELVGKDGSTTVLKEKTAVKAAEVIDCATMSRKALKAFIAEQ
IADAKAAGVLLSVHLKATMMKVSDPIMFGVIVEEFYNDVLTKHAAALAEVGFNANNGIGD
LYARIKDLPADKQAEIEADIQALYAERPALAMVNSDKGITNLHVPSDVIVDASMPAMIRD
SGKMWNAAGELQDAKAVIPDRCYAGIYQATIEDCKVNGAFDPTTMGSVPNVGLMAQKAEE
YGSHDKTFQIKADGVVRVVDGKGNVVLEQNVEAGDIFRMCQTKDAPIQDWVKLAVNRARL
SNTPAVFWLDPARAHDGVMIEKVQKYLKDHDTTGLDIRILAPVDAIKFSLARIREGKDTI
SVTGNVLRDYLTDLFPIMELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQLVEENFL
RWDSLGEFLALAASLEHLGNTYDNPRAKVLANTLDQATGKFLDTNKSPSRKVGGIDNRGS
HFYLTLYWAEALAAQTDDAALQARFAPLAKTLAENEATIVAELNAVQGKPADIGGYYAPD
AELTAKVMRPSQTLNSAIAAL

NT seq 2226 nt +upstreamnt +downstreamnt
atgcccacccgttccaagatcatctataccttcaccgacgaagcccccgccctcgccact
tactcgctgctgccgatcatcgaagcgttcaccgcttcggctgacatcgctgtcgaaact
cgcgacatttccctggctggccgtatccttgccgccttcccggagcaactgggcgcagag
aagcaagtaggcgatcacctggcggaactgggccagctggctaccacccctgaagccaac
atcatcaagctgccgaacatcagcgcctcggtaccgcagctcaaagccgcgatcaaggaa
ctgcaaggcaagggcttcaacatccctgactacgccgacgagccggccaccgcggaagaa
aaagaatcccgcgcccgctacgaccgcatcaagggctccgccgtgaacccggtgctgcgc
gaaggcaactccgaccgccgcgcgccgctgtcggtcaagaactacgcccgcaagcaccca
cacaagatgggcgcctgggccgctgactccaagtcgcacgttgcccacatgacccagggc
gacttctacggcagcgaaaaagccgcactgatcgaagctgacgacagcctgcgcatcgag
ctggtcggcaaagacggcagcaccaccgtgctgaaagaaaagaccgccgtcaaagccgcc
gaagtcatcgactgcgccaccatgagccgcaaggccctgaaagccttcatcgccgagcag
atcgccgatgccaaggccgctggcgtgctgctgtcggtgcacctgaaagccaccatgatg
aaggtctccgacccgatcatgttcggcgtcatcgtcgaagaattctacaacgacgtgctg
accaagcacgccgctgccctggccgaagtaggcttcaacgccaacaacggtatcggcgac
ctgtacgcccgcatcaaggacctgccagccgacaagcaggccgagatcgaagccgacatc
caggccctgtacgcagagcgcccagccctggccatggtcaactccgacaaaggcatcacc
aacctgcacgtgccgagcgacgtgatcgtcgacgcctcgatgccggccatgatccgtgac
tcgggcaagatgtggaacgccgcaggcgaactgcaagacgccaaggccgtgatcccggac
cgctgctacgccggcatctaccaggccaccatcgaagactgcaaggtcaacggtgccttc
gacccgaccaccatgggcagcgtgccgaacgttggcctgatggcgcagaaagccgaagag
tatggctcccacgacaagaccttccagatcaaggctgacggcgtggttcgcgtagtcgat
ggcaagggcaacgtcgtgctggagcagaacgtcgaagccggtgacatcttccgcatgtgc
cagaccaaggacgcgccgatccaggattgggtcaagctggccgtcaaccgtgcccgcctg
agcaacaccccggcggtgttctggctggacccggctcgtgcccacgacggcgtcatgatc
gagaaggtgcagaagtacctgaaagatcacgacaccaccggcctggacatccgtatcctg
gcaccggtcgacgccatcaagttctccctggcccgcatccgcgaaggcaaggacaccatc
tcggtgaccggcaacgtgctgcgcgactacctgaccgacctgttcccgatcatggaactg
ggcacaagcgccaagatgctgtcgatcgtgccgctgatgaacggcggtggcctgttcgaa
accggcgccggcggttcggctccgaagcacgtgcaacagctggttgaagagaacttcctg
cgttgggactcgctgggtgaattcctggccctggccgcttccctggagcacctgggcaac
acctacgacaacccgcgcgccaaggttctggccaacaccctggaccaggctaccggcaag
ttcctcgacaccaacaagtcgccatcgcgcaaagtcggcggtatcgacaaccgcggtagc
cacttctacctgaccctgtactgggccgaggccctggccgctcagacggacgacgctgcc
ctgcaggcacgcttcgcaccactggcaaaaaccctggccgagaacgaagcgaccatcgtc
gccgagctcaacgccgttcagggcaagccagccgacatcggcggctactacgccccggat
gccgagctgaccgccaaggtgatgcgcccaagccagaccctgaacagcgccatcgctgcc
ctgtaa

All links

Pathway (9)   
   KEGG PATHWAY (7)   
   KEGG MODULE (2)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JCVI-CMR (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (30)   

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