KEGG   Pseudomonas putida DLL-E4: DW66_0022
Entry
DW66_0022         CDS       T03439                                 
Name
(GenBank) DNA polymerase III subunit beta
  KO
K02338  DNA polymerase III subunit beta [EC:2.7.7.7]
Organism
ppud  Pseudomonas putida DLL-E4
Pathway
ppud03030  DNA replication
ppud03430  Mismatch repair
ppud03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ppud00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DW66_0022
   03430 Mismatch repair
    DW66_0022
   03440 Homologous recombination
    DW66_0022
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppud03032]
    DW66_0022
   03400 DNA repair and recombination proteins [BR:ppud03400]
    DW66_0022
Enzymes [BR:ppud01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DW66_0022
DNA replication proteins [BR:ppud03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     DW66_0022
DNA repair and recombination proteins [BR:ppud03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     DW66_0022
SSDB
Motif
Pfam: DNA_pol3_beta_2 DNA_pol3_beta DNA_pol3_beta_3
Other DBs
NCBI-ProteinID: AHZ74549
UniProt: A0A059UTJ0
Position
23390..24493
AA seq 367 aa
MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVQGQQLSLTGTDLEVELVGRVQLE
EPAEPGEITVPARKLMDICKSLPNDALIDIKVDEQKLLVKAGRSRFTLSTLPANDFPTVE
EGPGSLTCNLEQSKLRRLIERTSFAMAQQDVRYYLNGMLLEVSRNTLRAVSTDGHRLALC
SMSAPIEQDDRHQVIVPRKGILELARLLTDPEGMVSIVLGQHHIRATTGEFTFTSKLVDG
KFPDYERVLPKGGDKLVVGDRQALREAFSRTAILSNEKYRGIRLQLAAGQLKIQANNPEQ
EEAEEEISVDYEGSSLEIGFNVSYLLDVLGVMTTEQVRLILSDSNSSALLQEAGNDDSSY
VVMPMRL
NT seq 1104 nt   +upstreamnt  +downstreamnt
atgcatttcaccattcaacgcgaagccctgttgaaacccctgcaactggtcgccggtgtc
gtcgagcgccgtcagaccttgccggtcctgtccaacgtattgctggtcgtgcaaggccag
caactgtcgttgaccggtaccgacctggaagtcgaactggtaggccgcgtgcaactggaa
gagccggccgagcctggcgaaatcactgtcccggcccgcaagctgatggacatttgcaaa
agcctgccgaacgacgccctgatcgatatcaaggtcgacgagcagaaactgttggtcaag
gccggccgtagccgctttaccctgtcgaccctgccagccaatgacttcccgaccgtggaa
gaaggcccgggctcgctgacctgcaatctggaacagagcaagctgcgccgcctgatcgag
cgcaccagtttcgccatggcccagcaggatgtgcgctactacctcaacggcatgctgctg
gaggtttcccgcaacaccctgcgagctgtgtccactgacggtcaccgcctggcgctgtgc
tccatgagcgcaccgatcgagcaggatgatcgccaccaggtcatcgtgccacgcaaaggt
atcctcgaactggcacgcctgctgaccgatccggaaggcatggtcagcatcgtcctgggc
cagcaccacatccgtgctacaaccggtgagttcacctttacttccaagctggtggacggc
aagttcccggactacgagcgcgtactgcccaagggcggtgacaagctggtggtcggcgac
cgtcaggcgctgcgtgaagccttcagccgtactgcgattctttccaacgaaaagtaccgc
ggtatccgcctgcaactggctgctggccaactgaagatccaggccaacaaccccgagcag
gaagaagctgaagaagaaatcagcgtggactacgaaggtagctcgctagaaatcggtttc
aacgtcagctacctgctggacgtgctgggcgtaatgactaccgagcaagttcgtctgatc
ctgtccgattccaacagcagtgccctgctgcaggaagctggcaatgacgattcttcctac
gttgtcatgccaatgcgtctgtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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