KEGG   Pseudomonas putida HB3267: B479_21130
Entry
B479_21130        CDS       T02389                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
ppuh  Pseudomonas putida HB3267
Brite
KEGG Orthology (KO) [BR:ppuh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppuh03019]
    B479_21130 (rnc)
   03009 Ribosome biogenesis [BR:ppuh03009]
    B479_21130 (rnc)
   03036 Chromosome and associated proteins [BR:ppuh03036]
    B479_21130 (rnc)
Enzymes [BR:ppuh01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     B479_21130 (rnc)
Messenger RNA biogenesis [BR:ppuh03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     B479_21130 (rnc)
Ribosome biogenesis [BR:ppuh03009]
 Eukaryotic type
  90S particles
   RNase
    B479_21130 (rnc)
 Prokaryotic type
  rRNA processing factors
   B479_21130 (rnc)
Chromosome and associated proteins [BR:ppuh03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     B479_21130 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm
Other DBs
NCBI-ProteinID: AGA75116
Position
complement(4653774..4654463)
AA seq 229 aa
MSAPLARLERKLGYTFKNQDQMLLALTHRSYAGRNNERLEFLGDAILNFVAGEALFERFP
QAREGQLSRLRARLVKGETLARLARGFDLGDHLRLGSGELKSGGFRRESILADALEALIG
AIYLDADMETARERVLAWLADEFEGLTLVDTNKDPKTRLQEFLQSRSCELPRYEVVDIQG
EPHCRTFFVECEVVLLNNKSRGQGVSRRIAEQVAAASALIALGVENGND
NT seq 690 nt   +upstreamnt  +downstreamnt
atgagtgctccccttgcccgtctggagcgaaagctcggttataccttcaagaaccaggac
cagatgctcctggcactgacccatcgcagctacgccgggcgcaacaatgagcgcctggag
tttctcggtgacgccattctcaacttcgtcgccggcgaagcgctgttcgagcgcttcccg
caggcccgcgaaggccagctgtcgcgcttgcgcgcgcgcctggtcaagggtgagaccctg
gcccgcctggcccgtggtttcgacctgggcgatcacctgcgcctgggctcgggggagctc
aagagcggtggcttccgccgcgagtcgatcctggccgacgccctggaggcgctgattggc
gccatctacctggacgccgacatggaaacggcccgggagcgcgtgctggcctggctggcc
gatgaattcgaaggcctgaccctggttgataccaacaaggacccgaaaacccgcctgcag
gagttcctgcagtcgcgcagctgtgagctgccgcgttacgaagtggtggatatccagggc
gaaccgcactgccggaccttcttcgtcgaatgcgaagtggtgctgctgaacaacaagagc
cgtggccagggcgttagccggcgtatcgccgagcaagtcgccgccgcgtctgcactgatc
gccctgggcgtggagaatggcaatgactga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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