KEGG   Pseudomonas putida HB3267: B479_25095Help
Entry
B479_25095        CDS       T02389                                 

Definition
formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
ppuh  Pseudomonas putida HB3267
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:ppuh00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    B479_25095
Enzymes [BR:ppuh01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     B479_25095
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     B479_25095
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(5546679..5547491)
Genome map
AA seq 270 aa AA seqDB search
MPELPEVETTRRGIAPHLEGQRVSRVVVRDRRLRWPIPEDLDVRLSGQRIVSVERRAKYL
LINAEVGTLISHLGMSGNLRLVELGLPAAKHEHVDIELESGLMLRYTDPRRFGAMLWSLD
PLNHELLLRLGPEPLTDLFDGERLFQLSRGRSMAVKPFIMDNAVVVGVGNIYATEALFAA
GIDPRREAGGISRARYLKLAIEIKRVLAAAIEQGGTTLRDFIGGDGQPGYFQQELFVYGR
GGQPCKVCGTELREVKLGQRASVYCPRCQR
NT seq 813 nt NT seq  +upstreamnt  +downstreamnt
atgccggaattgccagaagtagaaaccacccgacgcggtattgcgccccatctggaaggc
cagcgtgtcagccgggtagtggtgcgcgaccggcgcctgcgctggccgattccggaagac
ctggatgtgcgactgtcggggcagcgcatcgtcagtgtcgagcggcgcgccaagtatctg
ttgatcaatgcagaggtcggcaccctgatcagtcacctgggcatgtcgggcaacctgcgc
ctggtcgaactgggcttgccggcggccaagcatgagcatgtggatatcgagctggagtcg
gggttgatgctgcgctacaccgacccgcgccgctttggcgcgatgctgtggagcctggac
ccgctcaatcacgaactgctgctgcgcctggggcctgaaccgctgaccgacctgttcgac
ggcgagcgactgttccagctgtcccgtgggcggtcgatggcggtcaagccgttcatcatg
gacaacgcggttgtggtgggagtgggcaacatctacgccaccgaggcgctgtttgccgct
ggcatcgacccccgtcgggaagcgggcgggatttcccgggcgcgctacttgaagctggcg
atcgagatcaagcgtgtgctggcggcggcgatcgaacagggcggcaccacgctacgcgac
ttcatcggtggcgacgggcagccggggtacttccagcaggaattgttcgtgtacgggcgg
ggcgggcagccgtgcaaggtgtgtggcacggagttgcgcgaggtgaagctggggcagagg
gcgagtgtgtattgcccgcgttgccagcgctga

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