KEGG   Pseudomonas putida NBRC 14164: PP4_11200
Entry
PP4_11200         CDS       T02707                                 
Symbol
nrdA
Name
(GenBank) ribonucleoside-diphosphate reductase alpha subunit
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
ppun  Pseudomonas putida NBRC 14164
Pathway
ppun00230  Purine metabolism
ppun00240  Pyrimidine metabolism
ppun01100  Metabolic pathways
ppun01232  Nucleotide metabolism
Module
ppun_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
ppun_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:ppun00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    PP4_11200 (nrdA)
   00240 Pyrimidine metabolism
    PP4_11200 (nrdA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppun03400]
    PP4_11200 (nrdA)
Enzymes [BR:ppun01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     PP4_11200 (nrdA)
DNA repair and recombination proteins [BR:ppun03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    PP4_11200 (nrdA)
SSDB
Motif
Pfam: Ribonuc_red_lgC ATP-cone Ribonuc_red_lgN
Other DBs
NCBI-ProteinID: BAN52973
Position
complement(1293331..1296210)
AA seq 959 aa
MQTDTTRENPQAKVPQAADSNQDLAATAPGQLRVIKRNGTVVPYTDDKITVAITKAFLAV
EGGTAAASSRIHDTVARLTEQVTATFKRRMPSGGTIHIEEIQDQVELALMRAGEQKVARD
YVIYRDQRAKERATRANTDAVVEPHPSIRITLADGSLAPLDMARLNTIISEACEGLAEVD
GDLIQRETLKNLYDGVAIKDVNTALVMTARTLVEREPNYSFVTARLLMDTLRAEGLGFLN
VADSATHHEMADLYAKALPAYIAKGIEFELLNPALADFDLEKLGKAINHERDQQFTYLGL
QTLYDRYFIHKDGVRFELPQVFFMRVAMGLALEEKDKEARAIEFYNLLSSFDYMASTPTL
FNAGTLRPQLSSCYLTTVPDDLSGIYHAIHDNAMLSKFAGGLGNDWTPVRALGSYIKGTN
GKSQGVVPFLKVVNDTAVAVNQGGKRKGAVCAYLETWHLDIEEFIELRKNTGDDRRRTHD
MNTANWIPDLFMKRVFDDGKWTLFSPSEVPDLHDLTGKAFEERYEYYEALTEYNKIKVFK
TIQAKDLWRKMLSMLFETGHPWLTFKDPCNLRSPQQHVGVVHSSNLCTEITLNTNKDEIA
VCNLGSINLPNHIVDGKLDTVKLQRTVNTAVRMLDNVIDINYYSVPQARNSNLKHRPVGL
GIMGFQDALYLQHIAYGSDAAVEFADKSMEAVSYFAIQASCDLADERGAYETFQGSLWSK
GILPLDSQQILIEARGQKYIDVDLNETLDWAPVRARVQKGIRNSNIMAIAPTATIANITG
VSQSIEPTYQNLYVKSNLSGEFTVINPYLVRDLKARGLWDSVMINDLKYYDGSVQQIERI
PQELKDLYATAFEVETKWIVDAASRRQKWIDQAQSLNLYIAGASGKKLDVTYRMAWYRGL
KTTYYLRALAATSTEKSTINTGKLNAVSSGGDSAPVQAAGPAPVPKACAIDEPDCEACQ
NT seq 2880 nt   +upstreamnt  +downstreamnt
atgcaaaccgacacaactcgcgagaacccgcaggccaaggtgccgcaggccgccgattcc
aaccaggatctggccgccaccgcccctggccaactgcgcgtgatcaagcgtaacggtact
gtcgtcccctacaccgacgacaagatcaccgttgccatcaccaaggcgttccttgcagtt
gaaggcggcaccgccgccgcttcgtcgcgcatccacgacaccgtcgcgcgcctgaccgaa
caggttaccgccacgttcaaacgtcgcatgccatcgggtggcaccatccacatcgaagaa
atccaggaccaggtagaactggccctgatgcgcgctggcgagcagaaagttgcccgcgac
tacgtgatctaccgcgaccagcgcgccaaggagcgtgccacccgcgccaacaccgacgcg
gtggtcgagccgcacccgagcatccgcatcaccctggccgacggcagcctggcgccgctc
gacatggcccgcctgaacaccatcatcagcgaagcctgcgaaggcctggctgaagtggat
ggcgacctgatccagcgcgaaaccctgaaaaacctgtacgacggcgttgccatcaaggac
gtcaacaccgccctggtgatgaccgcccgtaccctggtagagcgcgagccgaactactcg
ttcgttaccgcccgcctgctgatggacaccctgcgcgccgaaggcctgggcttcctgaat
gtagccgacagcgccacccaccacgagatggctgacctgtacgccaaggccctgccggcc
tacatcgccaaaggtatcgagttcgagctgctgaacccggccctggccgacttcgacctg
gaaaaactgggcaaggcgatcaaccacgagcgcgaccagcagttcacctatctgggcctg
cagaccctttacgaccgctacttcatccacaaggatggcgtgcgcttcgagctgccgcag
gtattcttcatgcgtgtggccatgggcctggcgctggaagagaaagacaaggaagcccgt
gcgatcgagttctacaacctgttgtcgtccttcgactacatggcctcgaccccgaccctg
ttcaacgccggtaccctgcgcccgcagctgtccagctgctacctgaccaccgtgccagac
gacctgtcgggcatctaccacgcgatccacgacaacgccatgctgtcgaaattcgctggc
ggcctgggcaacgactggacccctgtgcgtgcactgggctcctacatcaagggcaccaac
ggcaagtcccagggcgtcgtaccgttcctgaaagtggtcaacgacacagccgttgccgtc
aaccagggtggcaagcgcaagggggccgtgtgtgcctacctggaaacctggcacctggac
atcgaagagttcatcgagctgcgcaagaacaccggtgatgaccgccgtcgtacccacgac
atgaacaccgccaactggatccctgacctgttcatgaagcgtgtcttcgatgacggcaag
tggaccctgttctcgccttcggaagtgccagacctgcacgacctgaccggcaaggccttc
gaagagcgctacgagtactacgaagccctgaccgagtacaacaagatcaaggtgttcaag
accatccaggccaaagacctgtggcgcaagatgctgtcgatgctgttcgagaccggccac
ccgtggctgaccttcaaggacccgtgcaacctgcgttcgccgcagcagcacgtaggcgtg
gtccacagctcgaacctgtgcaccgagatcaccttgaacaccaacaaggacgagatcgcg
gtctgcaacctgggctcgatcaacctgccgaaccacatcgtcgacggcaagctggacacc
gttaagctgcaacgcaccgtgaacactgccgtgcgcatgctcgacaacgtgatcgacatc
aactactactcggtgccgcaagcgcgtaactcgaacctcaagcaccgcccggtcggcctg
ggcatcatgggcttccaggacgcactgtacctgcagcacatcgcctacggctccgacgct
gccgtcgagttcgccgacaagtcgatggaagcggtcagctacttcgcgatccaggcgtcc
tgcgacctggccgacgagcgtggtgcctacgagaccttccagggttcgctgtggtccaaa
ggcatcctgccgctggattcgcaacagatcctgatcgaggcccgtggccagaagtacatc
gacgtcgacctgaacgagaccctggactgggcaccggtgcgtgctcgcgtacaaaaaggt
attcgtaactcgaacatcatggccatcgcgccaaccgcgaccatcgccaacatcaccggc
gtgtcgcagtcgatcgagccgacctaccagaacctgtacgtgaaatcgaacctgtcgggc
gagttcaccgtgatcaacccgtacctggtccgtgacctgaaggcccgcggcctgtgggac
tcggtcatgatcaacgacctgaagtactacgacggttcggtgcagcagatcgagcgtatc
ccgcaagagctgaaagacctgtacgccaccgcgttcgaagtcgagaccaagtggattgtc
gacgctgcttcccgtcgccagaagtggatcgaccaggctcagtcgctgaacctgtacatc
gcgggtgcatcgggcaagaagctggacgttacctaccgcatggcctggtaccgtggcctg
aaaaccacctactacctccgtgccctggctgcgaccagcaccgagaagtcgaccatcaac
accggcaagctcaacgccgtttccagcggtggcgacagcgccccggtccaggcagccggc
ccggcgccagtgccgaaagcctgcgcgatcgacgagcctgactgcgaagcctgccagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (32)   

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