KEGG   Pseudomonas putida NBRC 14164: PP4_46080
Entry
PP4_46080         CDS       T02707                                 
Symbol
hcp
Name
(GenBank) putative type VI secretion system effector Hcp
  KO
K11903  type VI secretion system secreted protein Hcp
Organism
ppun  Pseudomonas putida NBRC 14164
Pathway
ppun02025  Biofilm formation - Pseudomonas aeruginosa
ppun03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ppun00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PP4_46080 (hcp)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    PP4_46080 (hcp)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ppun02044]
    PP4_46080 (hcp)
Secretion system [BR:ppun02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PP4_46080 (hcp)
SSDB
Motif
Pfam: T6SS_HCP
Other DBs
NCBI-ProteinID: BAN56461
Position
complement(5227413..5227673)
AA seq 86 aa
MAFDAFIQIDDNAGEALDEQYTNWIEINGYNFGVNQSTSATASSSGGATSGRTTLTNFTF
TKFLDTASCKLLEASCSGQHLKEVSE
NT seq 261 nt   +upstreamnt  +downstreamnt
atggctttcgacgctttcatccaaatcgacgataacgctggcgaagcgctggatgagcag
tacaccaactggatcgagatcaacggctacaacttcggtgtcaatcaaagcacgtcggct
accgcaagctcttccggcggtgcaacatcgggacgtaccaccttgaccaacttcacgttc
accaagtttctcgacaccgcgagttgcaagctgctggaagccagctgctcgggccagcat
ctcaaggaagtatcggagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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